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1. Main Page (1,386,755 views)
2. Software:TPP (700,039 views)
3. TPP Tutorial v2 (688,632 views)
4. TPP Tutorial v1 (673,813 views)
5. Building Peptide Atlas (445,326 views)
6. Software:SpectraST (445,081 views)
7. Formats:mzXML (443,550 views)
8. TPP Tutorial (381,177 views)
9. TPP:Windows Cygwin Installation (338,395 views)
10. Terry's compbio links (322,236 views)
11. ReleasePlanning (310,417 views)
12. Msconvert Wine (294,405 views)
13. TPP:Installing on Mac OSX (290,546 views)
14. Software:ReAdW (248,672 views)
15. Windows Installation Guide (225,220 views)
16. Msconvert Capabilities (221,725 views)
17. TPP:Developer Documentation (220,814 views)
18. TPP Tandem search (218,966 views)
19. TPP:V5Feedback (218,932 views)
20. Software:SuperHirn (195,608 views)
21. TPP Amazon Machine Images (179,381 views)
22. Software:Overview (150,049 views)
23. TPP AMZTPP (147,182 views)
24. TPP SEWW Demo2012 (141,865 views)
25. TPP:Frequently Asked Questions (141,100 views)
26. Software:PeptideSieve (137,892 views)
27. Software:massWolf (137,018 views)
28. TPP:4.4.0 Release Notes (132,383 views)
29. TPP:4.5.1 Release Notes (131,373 views)
30. PeptideSieveRetrainingTutorial (121,731 views)
31. Software:RemoteConvert (118,067 views)
32. TPP:Cloud (115,643 views)
33. TPP:Using Petunia (111,248 views)
34. Formats:pepXML (110,519 views)
35. TPP:Related Tools (102,712 views)
36. TPP:X!Tandem and the TPP (101,382 views)
37. TPP:Installing the Trans-Proteomic Pipeline (TPP) 4.4.0 on Mac OS X 10.6.4 (97,466 views)
38. TPP TWA:Tutorial (95,242 views)
39. Software:TIQAM (85,589 views)
40. TPP:Authors and Contributors (82,585 views)
41. Expert search and TPP usage (82,125 views)
42. Running the TPP docker image (81,339 views)
43. TPP:4.7.0 Release Notes (78,318 views)
44. Software:mzStar (78,298 views)
45. Software:PepXMLViewer (76,289 views)
46. Software:ProteinProphet (75,280 views)
47. TPP:4.8.0 Release Notes (74,489 views)
48. Terry's blog (72,300 views)
49. TPP:4.6.2 Release Notes (71,815 views)
50. Software:Libra (71,192 views)

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