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- Main Page (1,258,077 views)
- Software:TPP (628,169 views)
- TPP Tutorial v2 (610,016 views)
- TPP Tutorial v1 (583,886 views)
- Software:SpectraST (404,392 views)
- Formats:mzXML (404,276 views)
- Building Peptide Atlas (361,771 views)
- TPP Tutorial (343,840 views)
- TPP:Windows Cygwin Installation (280,664 views)
- Terry's compbio links (266,752 views)
- ReleasePlanning (250,264 views)
- TPP:Installing on Mac OSX (249,339 views)
- Msconvert Wine (246,712 views)
- Software:ReAdW (229,471 views)
- Windows Installation Guide (204,317 views)
- Msconvert Capabilities (195,162 views)
- TPP Tandem search (187,549 views)
- TPP:Developer Documentation (187,135 views)
- Software:SuperHirn (170,631 views)
- TPP:V5Feedback (168,715 views)
- TPP Amazon Machine Images (146,697 views)
- Software:Overview (132,005 views)
- Software:massWolf (125,045 views)
- TPP:4.5.1 Release Notes (119,891 views)
- TPP AMZTPP (119,768 views)
- Software:PeptideSieve (118,822 views)
- TPP:Frequently Asked Questions (112,957 views)
- TPP SEWW Demo2012 (112,878 views)
- TPP:4.4.0 Release Notes (109,032 views)
- TPP:Using Petunia (103,966 views)
- Software:RemoteConvert (100,401 views)
- Formats:pepXML (99,470 views)
- PeptideSieveRetrainingTutorial (98,433 views)
- TPP:Cloud (96,730 views)
- TPP:Installing the Trans-Proteomic Pipeline (TPP) 4.4.0 on Mac OS X 10.6.4 (87,717 views)
- TPP:Related Tools (86,262 views)
- TPP:X!Tandem and the TPP (84,461 views)
- Software:TIQAM (74,647 views)
- TPP TWA:Tutorial (72,895 views)
- Expert search and TPP usage (69,194 views)
- TPP:Authors and Contributors (68,961 views)
- Software:mzStar (68,956 views)
- Software:ProteinProphet (68,235 views)
- Software:Libra (63,036 views)
- Software:PeptideProphet (62,938 views)
- TPP:4.7.0 Release Notes (62,679 views)
- PeptideAtlas:Chromosomal coverage (61,642 views)
- TPP:4.8.0 Release Notes (60,764 views)
- Software:mzWiff (60,124 views)
- PABST peptide examples (58,449 views)