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1. Main Page (1,116,120 views)
2. Software:TPP (544,181 views)
3. TPP Tutorial v2 (530,637 views)
4. TPP Tutorial v1 (499,988 views)
5. Formats:mzXML (364,444 views)
6. Software:SpectraST (357,643 views)
7. TPP Tutorial (298,049 views)
8. Building Peptide Atlas (290,096 views)
9. TPP:Windows Cygwin Installation (229,782 views)
10. TPP:Installing on Mac OSX (213,135 views)
11. Software:ReAdW (205,491 views)
12. Terry's compbio links (197,959 views)
13. Msconvert Wine (196,077 views)
14. Windows Installation Guide (183,022 views)
15. ReleasePlanning (182,705 views)
16. Msconvert Capabilities (163,821 views)
17. TPP:Developer Documentation (158,018 views)
18. TPP Tandem search (151,691 views)
19. Software:SuperHirn (146,379 views)
20. TPP Amazon Machine Images (118,220 views)
21. TPP:V5Feedback (118,157 views)
22. Software:Overview (113,434 views)
23. TPP:4.5.1 Release Notes (109,863 views)
24. Software:massWolf (109,395 views)
25. Software:PeptideSieve (99,651 views)
26. TPP:Using Petunia (95,563 views)
27. TPP AMZTPP (93,860 views)
28. TPP:Frequently Asked Questions (91,385 views)
29. TPP SEWW Demo2012 (87,180 views)
30. TPP:4.4.0 Release Notes (86,984 views)
31. Formats:pepXML (84,469 views)
32. Software:RemoteConvert (80,116 views)
33. TPP:Cloud (78,243 views)
34. PeptideSieveRetrainingTutorial (74,620 views)
35. TPP:Installing the Trans-Proteomic Pipeline (TPP) 4.4.0 on Mac OS X 10.6.4 (73,944 views)
36. TPP:X!Tandem and the TPP (72,423 views)
37. TPP:Related Tools (71,459 views)
38. Software:TIQAM (64,646 views)
39. Software:mzStar (60,832 views)
40. Software:ProteinProphet (60,777 views)
41. TPP:Authors and Contributors (56,941 views)
42. Software:PeptideProphet (56,682 views)
43. Expert search and TPP usage (56,086 views)
44. TPP TWA:Tutorial (56,065 views)
45. Software:Libra (55,043 views)
46. Software:mzWiff (53,482 views)
47. PeptideAtlas:Chromosomal coverage (51,532 views)
48. PABST peptide examples (48,465 views)
49. Software:RAMP (48,168 views)
50. TPP:4.7.0 Release Notes (47,947 views)

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