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1. Main Page (1,365,844 views)
2. Software:TPP (690,445 views)
3. TPP Tutorial v2 (675,936 views)
4. TPP Tutorial v1 (657,123 views)
5. Software:SpectraST (438,659 views)
6. Formats:mzXML (436,733 views)
7. Building Peptide Atlas (428,078 views)
8. TPP Tutorial (375,411 views)
9. TPP:Windows Cygwin Installation (330,771 views)
10. Terry's compbio links (314,123 views)
11. ReleasePlanning (301,148 views)
12. TPP:Installing on Mac OSX (285,697 views)
13. Msconvert Wine (285,254 views)
14. Software:ReAdW (246,314 views)
15. Windows Installation Guide (222,489 views)
16. Msconvert Capabilities (218,464 views)
17. TPP:Developer Documentation (216,324 views)
18. TPP Tandem search (213,689 views)
19. TPP:V5Feedback (211,395 views)
20. Software:SuperHirn (192,208 views)
21. TPP Amazon Machine Images (174,659 views)
22. Software:Overview (147,682 views)
23. TPP AMZTPP (143,251 views)
24. TPP:Frequently Asked Questions (138,088 views)
25. TPP SEWW Demo2012 (137,877 views)
26. Software:PeptideSieve (135,645 views)
27. Software:massWolf (135,073 views)
28. TPP:4.5.1 Release Notes (129,872 views)
29. TPP:4.4.0 Release Notes (129,357 views)
30. PeptideSieveRetrainingTutorial (119,506 views)
31. Software:RemoteConvert (115,157 views)
32. TPP:Cloud (112,988 views)
33. TPP:Using Petunia (110,291 views)
34. Formats:pepXML (108,406 views)
35. TPP:Related Tools (100,090 views)
36. TPP:X!Tandem and the TPP (99,384 views)
37. TPP:Installing the Trans-Proteomic Pipeline (TPP) 4.4.0 on Mac OS X 10.6.4 (96,495 views)
38. TPP TWA:Tutorial (92,700 views)
39. Software:TIQAM (83,976 views)
40. Expert search and TPP usage (80,537 views)
41. TPP:Authors and Contributors (80,329 views)
42. Running the TPP docker image (78,335 views)
43. Software:mzStar (76,871 views)
44. TPP:4.7.0 Release Notes (76,047 views)
45. Software:PepXMLViewer (74,512 views)
46. Software:ProteinProphet (74,092 views)
47. TPP:4.8.0 Release Notes (72,629 views)
48. Terry's blog (70,286 views)
49. Software:Libra (70,193 views)
50. TPP:4.6.2 Release Notes (70,109 views)

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