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1. Main Page (1,118,519 views)
2. Software:TPP (546,358 views)
3. TPP Tutorial v2 (532,529 views)
4. TPP Tutorial v1 (500,941 views)
5. Formats:mzXML (365,853 views)
6. Software:SpectraST (358,480 views)
7. TPP Tutorial (299,154 views)
8. Building Peptide Atlas (290,197 views)
9. TPP:Windows Cygwin Installation (230,633 views)
10. TPP:Installing on Mac OSX (213,968 views)
11. Software:ReAdW (205,958 views)
12. Terry's compbio links (199,374 views)
13. Msconvert Wine (196,629 views)
14. Windows Installation Guide (183,139 views)
15. ReleasePlanning (183,133 views)
16. Msconvert Capabilities (164,441 views)
17. TPP:Developer Documentation (158,665 views)
18. TPP Tandem search (152,170 views)
19. Software:SuperHirn (146,973 views)
20. TPP:V5Feedback (119,261 views)
21. TPP Amazon Machine Images (118,411 views)
22. Software:Overview (113,734 views)
23. TPP:4.5.1 Release Notes (109,994 views)
24. Software:massWolf (109,697 views)
25. Software:PeptideSieve (99,893 views)
26. TPP:Using Petunia (95,733 views)
27. TPP AMZTPP (94,148 views)
28. TPP:Frequently Asked Questions (91,570 views)
29. TPP:4.4.0 Release Notes (87,892 views)
30. TPP SEWW Demo2012 (87,317 views)
31. Formats:pepXML (85,227 views)
32. Software:RemoteConvert (80,155 views)
33. TPP:Cloud (78,450 views)
34. PeptideSieveRetrainingTutorial (74,686 views)
35. TPP:Installing the Trans-Proteomic Pipeline (TPP) 4.4.0 on Mac OS X 10.6.4 (74,113 views)
36. TPP:X!Tandem and the TPP (72,676 views)
37. TPP:Related Tools (71,882 views)
38. Software:TIQAM (64,680 views)
39. Software:mzStar (60,954 views)
40. Software:ProteinProphet (60,888 views)
41. TPP:Authors and Contributors (57,435 views)
42. Software:PeptideProphet (56,792 views)
43. TPP TWA:Tutorial (56,281 views)
44. Expert search and TPP usage (56,124 views)
45. Software:Libra (55,227 views)
46. Software:mzWiff (53,623 views)
47. PeptideAtlas:Chromosomal coverage (51,565 views)
48. PABST peptide examples (48,496 views)
49. Software:RAMP (48,352 views)
50. TPP:4.8.0 Release Notes (48,118 views)

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