TPP Tutorials

Tutorials

The following tutorials are available for TPP and its related software:

• TPP_Tutorial - The definitive guide to getting started with the TPP.
• TPP_TWA:Tutorial - TPP Web launcher for Amazon. For starting instances of TPP in the cloud.
• TPP_AMZTPP:PetuniaTutorial - Guide for using the cloud capabilities of TPP's web interface, Petunia, to execute peptide identification searches.
• TPP_AMZTPP_Tutorial - Use the command line program amztpp to run a series of MS/MS identifications on a test data set using Amazon Web Services.
• TPP_SEWW_Demo2012 - Tutorial for using the Simple Executable Workflow Webapp (SEWW), a web-based application that enables users to run multiple executables as graphically depicted and configurable workflows.

Additional Sample Data Sources

• Example data is available from many locations including:
  • http://tools.proteomecenter.org/data.php
  • http://www.peptideatlas.org/repository/
  • http://sashimi.sourceforge.net/repository.html

Archived Tutorials

These tutorials are out of date and are no longer maintained.

• TPP_Tutorial_v1 - Tutorial for early versions of TPP.
• TPP_Tutorial_v2 - 2nd version of TPP tutorial.