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- TPP:7.0.0 Release Notes (6884 bytes)
14: * Updated UniMod reference helper file
15: * Updated protXML schema to v10 - TPP:Installing on Mac OSX (12870 bytes)
204: The following package will be installed or updated: - Software:XPRESS (1756 bytes)
8: ...s needed ... corrected expression values are then updated in the INTERACT list. For those SEQUEST users int... - TPP 7.0.0: Installing on Ubuntu 22.04 LTS (11616 bytes)
7: Updated 2024-04-16 - Software:PeptideSieve (6357 bytes)
22: ...available from our collaborator Chee-Hong! It is updated to PeptideSieve version .51 - Formats:pepXML (2274 bytes)
31: ** Schema updated to include omssa and myrimatch search engine name... - TPP Tutorial v1 (43187 bytes)
7: Note: Screenshots are updated to TPP V.4.0.2, 2008
180: In the updated window,
201: ...er the data conversion has completed and you have updated the page, '''Click the ‘PepXML’ link next to ... - Terry's compbio links (11123 bytes)
118: ... Download Swiss-Prot and other UniProt databases, updated every 3 weeks. UniProtKB/Swiss-Prot purportedly c... - Building Peptide Atlas (26978 bytes)
168: ...put_{concat,sorted}.PAidentlist'''. This field is updated to match the near-minimal covering set calculated...
170: ... of PeptideAtlasInput_concat.PAidentlist with the updated protid fields. - TPP:4.1 Release Notes (1819 bytes)
14: ...ibra condition files - for up to 8 channels (with updated isotopic correction factors);
23: *Spectrum Viewer updated to automatically select appropriate ion series fo... - TPP:4.2.0 Release Notes (4364 bytes)
38: **protXML schema updated to revision 6; adds optional calculated neutural ...
39: **pepXML schema updated to revision 13; adds charge states +6 and +7 - TPP:4.2.1 Release Notes (3668 bytes)
7: ...lling the new version. This will ensure that the updated MassHunter version 2 API is correctly installed.
53: *utils. are updated to build with current version of RAMP - TPP:4.3.0 Release Notes (13496 bytes)
47: * updated Windows build notes
245: ...ix inf loop bug caused by wrong array index being updated.
291: * getdb.swissprot utility: updated database download link
305: * building: boost library updated from 1.35.0 to 1.39.0. Includes Improved 64-bit ... - Recipe for generating proteotypic peptides for example database (10354 bytes)
2: ...de changes needed to show (almost) all peptides. Updated based on 2009-08 - ComputationalPredictionofProteotypicPeptides (6488 bytes)
6: ...available from our collaborator Chee-Hong! It is updated to PeptideSieve version .51 - Msconvert Wine (11104 bytes)
1: '''Last updated: 2019-01-09'''
13: '''WARNING 2: This content below has not been updated in a long time and is probably obsolete. Below is...
23: == Instructions for Ubuntu (Updated 1/9/2013) == - TPP:4.5.0 Release Notes (8358 bytes)
90: ** Updated meaning of $in_windows and introduced $in_cygwin ... - TPP:Installing the Trans-Proteomic Pipeline (TPP) 4.4.0 on Mac OS X 10.6.4 (12202 bytes)
2: *These guidelines are a simplified and updated version of the guidelines you can find here:
23: UPDATE 2: I've now updated to TPP v4.5 RAPTURE rev 2, Build 201203071418 usi...
33: UPDATE 3: I've updated to TPP v4.6 OCCUPY rev 2. System is still 10.6.8. - TPP SEWW Demo2012 (29568 bytes)
17: The Jetty distribution in sashimi has been updated to contain the necessary SEWW related files. - TPP WISB Demo2012 (16916 bytes)
17: The Jetty distribution in sashimi has been updated to contain the necessary WISB related files.
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