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- TPP:Developer Documentation (23931 bytes)
226: # InteractParser interact.xml file1.xml file2.xml
281: ====InteractParser====
282: InteractParser interact.xml file1.xml file2.xml file3.xml ..... - TPP:7.0.0 Release Notes (6884 bytes)
55: === [InteractParser:] === - Expert search and TPP usage (12929 bytes)
155: ...tein name, such as protein="YLR129W" when running InteractParser. Use -P option for this purpose. - TPP:4.2.0 Release Notes (4364 bytes)
57: *InteractParser: - Msconvert Capabilities (15313 bytes)
17: running: "/tools/bin/TPP/tpp-4.3.1/bin/InteractParser 'interact-prob.pep.xml' 'BSA_Myo_GAPDH_A_2.pep.xm...
77: running: "/tools/bin/TPP/tpp-4.3.1/bin/InteractParser 'interact-highprob.pep.xml' 'BSA_Myo_GAPDH_A_2.pe... - TPP:4.4.0 Release Notes (31941 bytes)
414: InteractParser: Make sure to not strip out the enzyme info when ...
416: InteractParser: BUGFIX prevent double delete of tag pointer.
419: InteractParser: Fix crash when -E option is not specified.
426: InteractParser: When an enzyme is given on the commandline overw...
438: xinteract PHOSPHO model and enable option InteractParser -P for correcting protein names in omssa output. - TPP:4.5.0 Release Notes (8358 bytes)
19: * InteractParser:
24: ** Allow InteractParser (or RAMP in general) to read FAIMS Compensation V...
114: * InteractParser - TPP:4.5.1 Release Notes (4270 bytes)
34: * Have InteractParser detect if the search engine is OMSSA and if so ap... - TPP:4.5.1 SVN Log (9734 bytes)
50: [InteractParser] Fix OMSSA's problem with n-term mods (trunk r553... - ReleasePlanning (12743 bytes)
219: * Have InteractParser detects if the search engine is OMSSA, and if so,... - TPP:4.5.0 SVN Log (242349 bytes)
1507: ...oteomic_pipeline/src/Visualization/InteractParser/InteractParser.cxx
1508: ...oteomic_pipeline/src/Visualization/InteractParser/InteractParser.h
1509: ...oteomic_pipeline/src/Visualization/InteractParser/InteractParserMain.cxx
1511: InteractParser: option for recording the retention_time_sec in p...
1720: InteractParser: SearchHit Changes, also defines bool_hash used i... - TPP:4.6.2 SVN Log (29692 bytes)
62: InteractParser: more robust code for finding the data.
454: fixes an issue when running InteractParser on OMSSA results and then getting duplicate
463: "InteractParser: auto-correct raw data paths, OMSSA auto correct ...
472: "InteractParser: auto-correct five digit scan numbers."
480: "InteractParser: fix problem with Comet's msms_run_summary tag" - TPP:4.6.2 Release Notes (2282 bytes)
- TPP:4.6.3 SVN Log (38611 bytes)
189: BUGFIX: InteractParser generated some bad results on Comet data with mis...
217: InteractParser: large memory issue bug.
347: * Runs interactparser on myrimatch output
467: InteractParser: had extra closing tags left over from original e...
478: InteractParser: when enzyme is given on the commandline it shoul... - TPP:4.6.3 Release Notes (4087 bytes)
52: * ''InteractParser'' - My new page (5054 bytes)
74: === InteractParser === - TPP:4.7.0 SVN Log (41695 bytes)
134: [InteractParser] Check missing protein_descr to prevent seg fault...
150: add DCT's fix so that InteractParser will write out proper closing tags when last spec...
290: ...ct to keep running even if -nI is used to disable InteractParser, for using xinteract on previously interacted fil...
455: InteractParser: -N (no reference option), better usage statement...
477: InteractParser: write directory to inputfile tag when the file p... - TPP:4.7.0 Release Notes (9008 bytes)
60: ...ct to keep running even if -nI is used to disable InteractParser, for using xinteract on previously interacted fil...
71: * '''InteractParser''':
109: * '''InteractParser''': - TPP:4.8.0 SVN Log (42174 bytes)
264: InteractParser: remove errorneous path from spectrum name when o...
268: InteractParser: BUGFIX When the MS datafile not read in successf... - TPP:4.8.0 Release Notes (9645 bytes)
88: * ''InteractParser:''
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