Glyco-peptide TODO list

From SPCTools

This page shows project tasks and progress (Back to main Glyco-peptide project page)

Dave

• Email data producers [done]
• Organize Hamid Data [done]
• Interact Hamid Data [done]
• Organize Safia Data [done]

• re-search Safia Data [ checking on search parameters ]
• Interact Safia Data [ checking on search parameters ]
• Organize Yong Data [done]
• Interact Yong Data [done]
• Organize Kelly Data [done]
• Interact Kelly Data [done]
• re-write UniPep/Human GlycoPeptideAtlas export script using B. Wollscheid format [mostly done]
• Enter sample information into PA
• Create new Human Glyco build for PA
• Generate build
• Load build (opt)
• Run export script
• Send list to Bernd

Eric

• Organize JWatts data [done]
• Search JWatts data [done]

Bernd W

• Generate surface protein list [done]
• Merge lists
• Filter master list

Jingchun

• Generate theoretical list from cancer biomarker candidates [done]

Paola

• Prioritize list
• Order peptides