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- TPP:4.7.1 Release Notes (58,068 views)
- Terry's blog (58,004 views)
- TPP:4.6.2 Release Notes (56,982 views)
- Running the TPP docker image (56,396 views)
- Software:PepXMLViewer (56,390 views)
- Software:RAMP (56,361 views)
- Software:MzXML2Search (55,604 views)
- Software:Prequips:Inclusion List Builder (55,315 views)
- Software:msBID (53,602 views)
- Prequips:Eclipse Setup (53,559 views)
- Software:ASAPRatio (51,409 views)
- Software:Pep3D (50,995 views)
- Software:trapper (49,278 views)
- Software:mzBruker (49,216 views)
- Software:readmzXML (48,547 views)
- Software:TPP-MaRiMba (47,303 views)
- TPP:4.5.0 Release Notes (46,175 views)
- TPP:Documentation (45,986 views)
- Software:Firegoose, Gaggle, and PIPE (45,353 views)
- TPP 4.5.2: Installing on Ubuntu 10.04.3 (42,998 views)
- Software:CompassXport (40,763 views)
- TPP 5.2.0: Installing on Ubuntu 18.04 LTS (40,161 views)
- Software:XPRESS (39,581 views)
- TPP:4.6.3 Release Notes (39,304 views)
- TPP:Example data analysis (37,846 views)
- Spectrast.params (37,658 views)
- TPP:6.0.0 Release Notes (36,832 views)
- TPP:Supported Search Engines (36,315 views)
- Software:Mayu (35,524 views)
- TPP:5.0.0 Release Notes (35,174 views)
- TPP:4.6.0 Release Notes (34,783 views)
- Software:Prequips (33,930 views)
- Software:ProbID (33,903 views)
- TPP 4.3.1: Installing on Ubuntu 10.04 (33,791 views)
- GetTransitionsAPI (33,511 views)
- TPP:Building Windows-native binaries with Mingw (32,642 views)
- Developer: Boost CPP libraries (32,481 views)
- Software:Out2XML (32,353 views)
- Software:SWATHProphet (31,677 views)
- Software:Tandem2XML (31,438 views)
- TPP:5.1.0 Release Notes (30,725 views)
- Software:Mascot2XML (30,006 views)
- Software:QualScore (29,685 views)
- Recipe for generating proteotypic peptides for example database (29,650 views)
- Software:JRAP (28,881 views)
- Software:Petunia (28,499 views)
- PABST (28,338 views)
- Linux Installation Guides (28,329 views)
- Processing glycopeptide data (28,309 views)
- Glyco-peptide TODO list (28,288 views)