Glyco-peptide TODO list
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| Revision as of 06:28, 29 August 2008 Dcampbel (Talk | contribs) ← Previous diff |
Revision as of 06:59, 1 September 2008 Dcampbel (Talk | contribs) Next diff → |
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| * Organize Safia Data [done] | * Organize Safia Data [done] | ||
| - | * re-search Safia Data [ checking on search parameters ] | + | * re-search Safia Data [done] |
| - | * Interact Safia Data [ checking on search parameters ] | + | * Interact Safia Data [done] |
| * Organize Yong Data [done] | * Organize Yong Data [done] | ||
| * Interact Yong Data [done] | * Interact Yong Data [done] | ||
| Line 14: | Line 14: | ||
| * Interact Kelly Data [done] | * Interact Kelly Data [done] | ||
| * re-write UniPep/Human GlycoPeptideAtlas export script using B. Wollscheid format [mostly done] | * re-write UniPep/Human GlycoPeptideAtlas export script using B. Wollscheid format [mostly done] | ||
| - | * Enter sample information into PA | + | * Enter sample information into PA [done] |
| - | * Create new Human Glyco build for PA | + | * Create new Human Glyco build for PA [done] |
| - | * Generate build | + | |
| - | * Load build (opt) | + | (optional) |
| + | * Add RuthH data to mouse glyco atlas | ||
| + | * Export peptides; look for human orthologs | ||
| + | |||
| + | |||
| + | * Generate build | ||
| + | * Load build (optional) | ||
| * Run export script | * Run export script | ||
| * Send list to Bernd | * Send list to Bernd | ||
Revision as of 06:59, 1 September 2008
This page shows project tasks and progress (Back to main Glyco-peptide project page)
Dave
- Email data producers [done]
- Organize Hamid Data [done]
- Interact Hamid Data [done]
- Organize Safia Data [done]
- re-search Safia Data [done]
- Interact Safia Data [done]
- Organize Yong Data [done]
- Interact Yong Data [done]
- Organize Kelly Data [done]
- Interact Kelly Data [done]
- re-write UniPep/Human GlycoPeptideAtlas export script using B. Wollscheid format [mostly done]
- Enter sample information into PA [done]
- Create new Human Glyco build for PA [done]
(optional)
- Add RuthH data to mouse glyco atlas
- Export peptides; look for human orthologs
- Generate build
- Load build (optional)
- Run export script
- Send list to Bernd
Eric
- Organize JWatts data [done]
- Search JWatts data [done]
Bernd W
- Generate surface protein list [done]
- Merge lists
- Filter master list
Jingchun
- Generate theoretical list from cancer biomarker candidates [done]
Paola
- Prioritize list
- Order peptides
