User contributions
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- 20:05, 14 February 2017 (hist) (diff) Terry's compbio links (→Personal) (top)
- 20:05, 14 February 2017 (hist) (diff) Terry's compbio links (→Personal)
- 22:25, 25 January 2017 (hist) (diff) Terry's compbio links (→Personal)
- 22:23, 25 January 2017 (hist) (diff) Terry's compbio links (→Personal)
- 22:23, 25 January 2017 (hist) (diff) Terry's compbio links (→Personal)
- 19:45, 3 January 2017 (hist) (diff) Links on mindfulness, meditation, and Buddhism (top)
- 19:44, 3 January 2017 (hist) (diff) Links on mindfulness, meditation, and Buddhism
- 19:44, 3 January 2017 (hist) (diff) Links on mindfulness, meditation, and Buddhism
- 19:42, 3 January 2017 (hist) (diff) m Links on mindfulness, meditation, and Buddhism
- 21:06, 12 September 2016 (hist) (diff) Terry's compbio links (→Terry Farrah's Computational Biology Links)
- 21:23, 6 September 2016 (hist) (diff) Terry's compbio links (→ISB specific)
- 21:22, 6 September 2016 (hist) (diff) Terry's compbio links (→ISB specific)
- 21:16, 6 September 2016 (hist) (diff) Terry's compbio links (→ISB specific)
- 00:50, 17 June 2016 (hist) (diff) Terry's compbio links (→Terry Farrah's Computational Biology Links)
- 00:49, 17 June 2016 (hist) (diff) Terry's compbio links (→Terry Farrah's Computational Biology Links)
- 21:18, 17 December 2015 (hist) (diff) Terry's compbio links (→General genomics)
- 23:22, 13 April 2015 (hist) (diff) Terry's compbio links (→ISB: Inova & Family Genomics)
- 21:15, 25 March 2015 (hist) (diff) Terry's compbio links (→ISB: Inova & Family Genomics)
- 18:18, 4 February 2015 (hist) (diff) Terry's compbio links (→Personal)
- 21:53, 29 January 2015 (hist) (diff) Terry's compbio links (→ISB: Inova & Family Genomics)
- 21:37, 29 January 2015 (hist) (diff) Terry's compbio links (→Personal)
- 18:29, 28 January 2015 (hist) (diff) Terry's compbio links (→ISB specific)
- 19:54, 4 December 2014 (hist) (diff) Terry's compbio links (→ISB: Inova & Family Genomics)
- 00:57, 25 November 2014 (hist) (diff) Terry's compbio links (→ISB specific)
- 01:22, 11 November 2014 (hist) (diff) Terry's compbio links (→General genomics)
- 22:11, 10 November 2014 (hist) (diff) Terry's compbio links (→ISB: Inova & Family Genomics)
- 15:43, 11 October 2014 (hist) (diff) Terry's compbio links (→ISB: Inova & Family Genomics)
- 15:43, 11 October 2014 (hist) (diff) Terry's compbio links (→ISB: Inova & Family Genomics)
- 20:50, 30 September 2014 (hist) (diff) Terry's compbio links (→ISB: Inova & Family Genomics)
- 18:29, 29 September 2014 (hist) (diff) m Terry's compbio links (→General genomics)
- 18:28, 29 September 2014 (hist) (diff) Terry's compbio links (→General genomics)
- 18:28, 29 September 2014 (hist) (diff) Terry's compbio links (→General genomics)
- 21:33, 28 July 2014 (hist) (diff) m Terry's compbio links (→ISB: Inova & Family Genomics)
- 21:32, 28 July 2014 (hist) (diff) Terry's compbio links (→ISB: Inova & Family Genomics)
- 22:46, 16 July 2014 (hist) (diff) Terry's compbio links (→General genomics)
- 23:34, 16 June 2014 (hist) (diff) Terry's compbio links (→General programming)
- 21:53, 21 May 2014 (hist) (diff) Terry's compbio links (→General genomics)
- 21:52, 21 May 2014 (hist) (diff) Terry's compbio links (→General genomics)
- 21:36, 21 May 2014 (hist) (diff) Terry's compbio links (→General genomics)
- 19:42, 21 May 2014 (hist) (diff) Terry's compbio links (→ISB: Inova & Family Genomics)
- 03:45, 16 May 2014 (hist) (diff) Terry's compbio links (→Personal)
- 00:18, 30 April 2014 (hist) (diff) Terry's compbio links (→Personal)
- 16:35, 20 April 2014 (hist) (diff) Terry's compbio links (→General genomics)
- 18:06, 17 April 2014 (hist) (diff) Terry's compbio links (→General genomics)
- 18:05, 17 April 2014 (hist) (diff) Terry's compbio links (→General genomics)
- 00:17, 17 April 2014 (hist) (diff) m Terry's compbio links (→General genomics)
- 00:16, 17 April 2014 (hist) (diff) Terry's compbio links (→Terry Farrah's Computational Biology Links)
- 21:28, 11 April 2014 (hist) (diff) Terry's compbio links (→Genomics stuff)
- 21:27, 11 April 2014 (hist) (diff) Terry's compbio links (→Terry Farrah's Computational Biology Links)
- 21:26, 11 April 2014 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 21:25, 11 April 2014 (hist) (diff) Terry's compbio links (→Terry Farrah's Computational Biology Links)
- 21:24, 11 April 2014 (hist) (diff) Terry's compbio links (→Terry Farrah's Computational Biology Links)
- 21:23, 11 April 2014 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 21:22, 11 April 2014 (hist) (diff) Terry's compbio links (→Genomics stuff)
- 19:51, 11 April 2014 (hist) (diff) Terry's compbio links (→Genomics stuff)
- 19:50, 11 April 2014 (hist) (diff) Terry's compbio links
- 20:19, 31 January 2014 (hist) (diff) Terry's compbio links (→Proteomics stuff)
- 00:26, 21 November 2013 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 23:37, 1 March 2013 (hist) (diff) m Using mProphet at ISB (top)
- 23:36, 1 March 2013 (hist) (diff) m Using mProphet at ISB (→Set up environment variables)
- 23:23, 1 March 2013 (hist) (diff) m Using mProphet at ISB
- 23:20, 1 March 2013 (hist) (diff) m Using mProphet at ISB
- 23:16, 1 March 2013 (hist) (diff) Using mProphet at ISB (Updated for 2013)
- 22:00, 25 January 2013 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 19:56, 30 October 2012 (hist) (diff) m TPP SEWW Demo2012
- 19:49, 30 October 2012 (hist) (diff) TPP SEWW Demo2012 (→9. Exploring the output)
- 19:31, 30 October 2012 (hist) (diff) TPP SEWW Demo2012 (→9. Exploring the output)
- 06:36, 30 October 2012 (hist) (diff) PeptideAtlas Pipeline Retool 2012/13 (top)
- 23:51, 29 October 2012 (hist) (diff) PeptideAtlas Pipeline Retool 2012/13
- 23:50, 29 October 2012 (hist) (diff) Building Peptide Atlas (top)
- 23:28, 29 October 2012 (hist) (diff) TPP SEWW Demo2012 (→8. Run a workflow)
- 23:27, 29 October 2012 (hist) (diff) m TPP SEWW Demo2012 (→8. Run a workflow)
- 23:27, 29 October 2012 (hist) (diff) m TPP SEWW Demo2012 (→8. Run a workflow)
- 23:27, 29 October 2012 (hist) (diff) TPP SEWW Demo2012 (→8. Run a workflow)
- 23:19, 29 October 2012 (hist) (diff) TPP SEWW Demo2012 (→4. Setup the initial input)
- 23:18, 29 October 2012 (hist) (diff) TPP SEWW Demo2012 (→4. Setup the initial input)
- 23:15, 29 October 2012 (hist) (diff) TPP SEWW Demo2012 (→4. Setup the initial input)
- 23:04, 29 October 2012 (hist) (diff) TPP SEWW Demo2012 (→2. Setup the template)
- 22:10, 26 October 2012 (hist) (diff) TPP SEWW Demo2012 (→2. Install Jetty and SEWW)
- 21:37, 3 October 2012 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 19:57, 7 August 2012 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 20:31, 21 March 2012 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 20:27, 21 March 2012 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 20:27, 21 March 2012 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 22:32, 2 March 2012 (hist) (diff) Links on mindfulness, meditation, and Buddhism
- 23:21, 16 February 2012 (hist) (diff) TPP:Frequently Asked Questions (→TPP Frequently Asked Questions)
- 23:41, 24 December 2011 (hist) (diff) Links on mindfulness, meditation, and Buddhism
- 22:05, 24 December 2011 (hist) (diff) m Links on mindfulness, meditation, and Buddhism
- 16:46, 23 December 2011 (hist) (diff) Links on mindfulness, meditation, and Buddhism
- 16:43, 23 December 2011 (hist) (diff) Links on mindfulness, meditation, and Buddhism
- 16:41, 23 December 2011 (hist) (diff) Links on mindfulness, meditation, and Buddhism
- 05:11, 23 December 2011 (hist) (diff) Links on mindfulness, meditation, and Buddhism
- 05:06, 23 December 2011 (hist) (diff) Links on mindfulness, meditation, and Buddhism
- 04:59, 23 December 2011 (hist) (diff) Links on mindfulness, meditation, and Buddhism
- 03:59, 23 December 2011 (hist) (diff) Terry's compbio links (→A few other Links)
- 21:12, 14 December 2011 (hist) (diff) TPP Tutorial v2 (→2. Download and install the test data and database)
- 20:23, 14 December 2011 (hist) (diff) TPP Tutorial v2 (→3. Convert raw data to the mzML format)
- 17:57, 6 December 2011 (hist) (diff) m Terry's compbio links
- 17:17, 2 December 2011 (hist) (diff) Terry's compbio links (→A few other Links)
- 19:22, 1 December 2011 (hist) (diff) m Building Peptide Atlas (→Deprecated functionality that may be useful again someday)
- 01:40, 26 August 2011 (hist) (diff) Using mProphet at ISB
- 01:38, 26 August 2011 (hist) (diff) Using mProphet at ISB
- 01:23, 26 August 2011 (hist) (diff) Using mProphet at ISB
- 01:08, 26 August 2011 (hist) (diff) Using mProphet at ISB
- 00:37, 26 August 2011 (hist) (diff) Terry's compbio links (→Proteomics stuff)
- 18:02, 12 August 2011 (hist) (diff) Terry's compbio links (→General programming stuff)
- 20:41, 11 August 2011 (hist) (diff) Terry's compbio links (→Proteomics stuff)
- 23:02, 14 June 2011 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 21:38, 26 April 2011 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 23:22, 15 April 2011 (hist) (diff) Terry's compbio links (→General programming stuff)
- 00:17, 15 April 2011 (hist) (diff) Terry's compbio links (→Terry Farrah's Computational Biology Links)
- 04:04, 13 January 2011 (hist) (diff) Building Peptide Atlas (→Step02sc: Estimate protein concentrations)
- 03:14, 13 January 2011 (hist) (diff) Building Peptide Atlas (→Step02sc: Estimate protein concentrations)
- 03:12, 13 January 2011 (hist) (diff) Building Peptide Atlas (→Run steps 02 through 08 of the build pipeline)
- 21:01, 30 November 2010 (hist) (diff) Terry's compbio links
- 20:59, 30 November 2010 (hist) (diff) Terry's compbio links (→Terry Farrah's Computational Biology Links)
- 19:06, 16 November 2010 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 19:06, 16 November 2010 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 21:43, 11 October 2010 (hist) (diff) Terry's compbio links (→General programming stuff)
- 21:23, 11 October 2010 (hist) (diff) Terry's compbio links (→General programming stuff)
- 18:45, 20 August 2010 (hist) (diff) m PeptideAtlas:Chromosomal coverage (→Interpreting the graphical depiction) (top)
- 20:44, 10 August 2010 (hist) (diff) PeptideAtlas:Chromosomal coverage
- 18:20, 10 August 2010 (hist) (diff) PeptideAtlas:Chromosomal coverage
- 18:17, 10 August 2010 (hist) (diff) Software:PeptideAtlas (top)
- 23:06, 8 June 2010 (hist) (diff) Processing glycopeptide data (→Notes on how to analyze) (top)
- 22:57, 8 June 2010 (hist) (diff) Processing glycopeptide data (→Notes on how to analyze)
- 18:54, 18 May 2010 (hist) (diff) Building Peptide Atlas (→Step02: Download latest fasta files from web for reference DB (also called biosequence set))
- 18:52, 18 May 2010 (hist) (diff) Building Peptide Atlas (→Step02: Download latest fasta files from web for reference DB (also called biosequence set))
- 18:41, 18 May 2010 (hist) (diff) Building Peptide Atlas (→Step 02a: Compile protein identifications)
- 18:38, 18 May 2010 (hist) (diff) Building Peptide Atlas (→Step 02a: Compile protein identifications)
- 18:40, 17 May 2010 (hist) (diff) Building Peptide Atlas (→Ensure that the file $PIPELINE/etc/protid_priorities.csv contains protein identifier prioritization for your species)
- 18:38, 17 May 2010 (hist) (diff) Building Peptide Atlas
- 18:36, 17 May 2010 (hist) (diff) Building Peptide Atlas
- 18:35, 17 May 2010 (hist) (diff) Building Peptide Atlas
- 18:33, 17 May 2010 (hist) (diff) m Building Peptide Atlas
- 18:27, 17 May 2010 (hist) (diff) m Building Peptide Atlas (→If any protein IDS are overly long (SpectraST builds only)
- 18:27, 17 May 2010 (hist) (diff) Building Peptide Atlas
- 18:21, 17 May 2010 (hist) (diff) m Building Peptide Atlas
- 18:17, 17 May 2010 (hist) (diff) m Building Peptide Atlas (→=If any protein IDS are overly long (SpectraST builds only)
- 18:17, 17 May 2010 (hist) (diff) Building Peptide Atlas
- 18:14, 17 May 2010 (hist) (diff) Building Peptide Atlas (→If you ran multiple search engines for each experiment, combine ''per experiment'' using iProphet, then run ProteinProphet on those results.)
- 18:13, 17 May 2010 (hist) (diff) Building Peptide Atlas (Major consolidation)
- 20:39, 31 March 2010 (hist) (diff) Msconvert Capabilities
- 20:48, 30 March 2010 (hist) (diff) Building Peptide Atlas (→Calculate chromosomal coordinates)
- 21:05, 29 March 2010 (hist) (diff) Terry's compbio links
- 22:57, 17 March 2010 (hist) (diff) Terry's compbio links
- 22:56, 17 March 2010 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 19:56, 17 March 2010 (hist) (diff) Msconvert Capabilities
- 18:59, 17 March 2010 (hist) (diff) Msconvert Capabilities
- 18:58, 17 March 2010 (hist) (diff) Msconvert Capabilities
- 18:46, 17 March 2010 (hist) (diff) Raw MS file conversion (→remoteconvert.pl) (top)
- 18:37, 17 March 2010 (hist) (diff) Msconvert Capabilities
- 18:36, 17 March 2010 (hist) (diff) Msconvert Capabilities
- 18:35, 17 March 2010 (hist) (diff) Msconvert Capabilities
- 18:34, 17 March 2010 (hist) (diff) Msconvert Capabilities
- 18:30, 17 March 2010 (hist) (diff) Msconvert Capabilities
- 18:29, 17 March 2010 (hist) (diff) Msconvert Capabilities
- 18:39, 1 March 2010 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 04:45, 23 February 2010 (hist) (diff) Terry's compbio links
- 01:42, 11 February 2010 (hist) (diff) PABST peptide examples (top)
- 23:03, 3 February 2010 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 05:05, 21 January 2010 (hist) (diff) Terry's compbio links
- 04:12, 17 December 2009 (hist) (diff) Protein identification terminology (top)
- 04:11, 17 December 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 03:59, 17 December 2009 (hist) (diff) SearchProteins (top)
- 03:39, 8 December 2009 (hist) (diff) PABST peptide examples
- 21:48, 1 December 2009 (hist) (diff) Building Peptide Atlas (→Outline of May 2009 pipeline (with post-May updates))
- 21:36, 18 November 2009 (hist) (diff) Building Peptide Atlas (→Outline of May 2009 pipeline (with post-May updates))
- 19:32, 18 November 2009 (hist) (diff) Building Peptide Atlas (→Outline of May 2009 pipeline (with post-May updates))
- 18:32, 16 November 2009 (hist) (diff) Building Peptide Atlas (→Gather peptides, load into DB, and update probabilities)
- 23:56, 28 October 2009 (hist) (diff) Building Peptide Atlas (→Outline of May 2009 pipeline (with post-May updates))
- 18:03, 27 October 2009 (hist) (diff) Building Peptide Atlas (→Outline of May 2009 pipeline (with post-May updates))
- 18:50, 23 October 2009 (hist) (diff) Terry's compbio links (→General programming stuff)
- 19:36, 16 October 2009 (hist) (diff) Scheduling on regis cluster (top)
- 19:33, 16 October 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 15:05, 16 October 2009 (hist) (diff) Raw MS file conversion (→remoteconvert.pl)
- 15:03, 16 October 2009 (hist) (diff) Raw MS file conversion (→remoteconvert.pl)
- 15:02, 16 October 2009 (hist) (diff) Raw MS file conversion
- 14:53, 16 October 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 21:06, 15 October 2009 (hist) (diff) Processing glycopeptide data (→Notes on how to analyze)
- 19:15, 8 October 2009 (hist) (diff) Terry's compbio links (→General programming stuff)
- 21:18, 16 September 2009 (hist) (diff) PABST peptide examples (→Examples to illustrate various settings)
- 21:18, 16 September 2009 (hist) (diff) PABST peptide examples (→Examples to illustrate various settings)
- 21:09, 16 September 2009 (hist) (diff) PABST peptide examples (→Examples to illustrate various settings)
- 21:08, 16 September 2009 (hist) (diff) PABST peptide examples (→Examples to illustrate various settings)
- 21:07, 16 September 2009 (hist) (diff) PABST peptide examples (→Examples to illustrate various settings)
- 21:05, 16 September 2009 (hist) (diff) PABST peptide examples (→Usage notes)
- 21:04, 16 September 2009 (hist) (diff) PABST peptide examples
- 21:02, 16 September 2009 (hist) (diff) PABST peptide examples
- 20:11, 16 September 2009 (hist) (diff) PABST peptide examples
- 18:44, 16 September 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 18:44, 16 September 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 21:17, 15 September 2009 (hist) (diff) Building Peptide Atlas (→Outline of May 2009 pipeline (with later updates))
- 21:17, 15 September 2009 (hist) (diff) Building Peptide Atlas (→Outline of new pipeline)
- 16:57, 15 September 2009 (hist) (diff) Terry's compbio links (→Proteomics stuff)
- 16:31, 15 September 2009 (hist) (diff) Terry's compbio links (→Proteomics stuff)
- 15:48, 15 September 2009 (hist) (diff) Building Peptide Atlas (→Compiling protein information for existing atlases)
- 23:56, 12 September 2009 (hist) (diff) Building Peptide Atlas
- 21:19, 28 August 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 21:19, 28 August 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 21:05, 28 August 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 20:53, 28 August 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 18:49, 28 August 2009 (hist) (diff) TPP Tutorial v2 (→2. Download and install the test data and database)
- 00:50, 28 August 2009 (hist) (diff) TPP Tutorial v2 (→5. Search data with SpectraST)
- 23:28, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→5. Search data with SpectraST)
- 23:24, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→5. Search data with SpectraST)
- 23:23, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→5. Search data with SpectraST)
- 23:19, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→5. Search data with SpectraST)
- 21:08, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→4. Search data with X!Tandem)
- 21:08, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→4. Search data with X!Tandem)
- 20:51, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→2. Download and install the test data and database)
- 20:48, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→Quick Start to data analysis using the TPP)
- 20:34, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→3. Convert raw data to the mzML format)
- 20:27, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→4. Search data with X!Tandem)
- 20:23, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→4. Search data with X!Tandem)
- 20:20, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→3. Convert raw data to the mzML format)
- 20:18, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→2. Download and install the test data and database)
- 20:16, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→3. Convert raw data to the mzML format)
- 20:02, 27 August 2009 (hist) (diff) TPP Tutorial v2 (→2. Download and install the test data and database)
- 17:48, 27 August 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 23:15, 26 August 2009 (hist) (diff) TPP Tutorial v2 (→3. Convert raw data to the mzML format)
- 23:12, 26 August 2009 (hist) (diff) TPP Tutorial v2 (→2. Download and install the test data and database)
- 23:03, 26 August 2009 (hist) (diff) Windows Installation Guide (→First install ActivePerl 5.8)
- 23:02, 26 August 2009 (hist) (diff) Windows Installation Guide (→Go to the TPP page at the [http://sourceforge.net/project/showfiles.php?group_id=69281&package_id=126912 Sourceforge website])
- 22:54, 26 August 2009 (hist) (diff) Windows Installation Guide (→Now install TPP)
- 22:40, 26 August 2009 (hist) (diff) Windows Installation Guide (→Go to the TPP page at the [http://sourceforge.net/project/showfiles.php?group_id=69281&package_id=126912 Sourceforge website])
- 22:40, 26 August 2009 (hist) (diff) Windows Installation Guide
- 22:20, 26 August 2009 (hist) (diff) Windows Installation Guide (→First install ActivePerl 5.8)
- 22:20, 26 August 2009 (hist) (diff) Windows Installation Guide
- 22:17, 26 August 2009 (hist) (diff) Windows Installation Guide (→DON'T click "Download Now" -- click "Get ActivePerl" in right sidebar, then click "Download" from next screen.)
- 22:16, 26 August 2009 (hist) (diff) Windows Installation Guide (→Go to [http://www.activestate.com/Products/activeperl www.activestate.com/Products/activeperl])
- 22:14, 26 August 2009 (hist) (diff) Windows Installation Guide (→First install ActivePerl 5.8)
- 00:58, 25 August 2009 (hist) (diff) TPP Tutorial v2 (→6. Validation of Peptide-Spectrum assignments with PeptideProphet)
- 20:20, 24 August 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 19:16, 24 August 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 18:00, 24 August 2009 (hist) (diff) Expert search and TPP usage (top)
- 17:18, 21 August 2009 (hist) (diff) SearchProteins
- 17:17, 21 August 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 21:13, 19 August 2009 (hist) (diff) Protein identification terminology (→Protein Presence Levels)
- 21:12, 19 August 2009 (hist) (diff) Protein identification terminology
- 21:10, 19 August 2009 (hist) (diff) Protein identification terminology
- 21:08, 19 August 2009 (hist) (diff) Protein identification terminology
- 21:08, 19 August 2009 (hist) (diff) Protein identification terminology
- 21:07, 19 August 2009 (hist) (diff) Protein identification terminology
- 21:02, 19 August 2009 (hist) (diff) Protein identification terminology
- 20:57, 19 August 2009 (hist) (diff) Protein identification terminology
- 20:30, 19 August 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 20:29, 19 August 2009 (hist) (diff) Building Peptide Atlas
- 18:20, 18 August 2009 (hist) (diff) Building Peptide Atlas (→Outline of new pipeline)
- 18:05, 17 August 2009 (hist) (diff) Building Peptide Atlas (→Outline of new pipeline)
- 20:37, 14 August 2009 (hist) (diff) Building Peptide Atlas (→Outline of new pipeline)
- 20:37, 14 August 2009 (hist) (diff) Building Peptide Atlas (→Outline of new pipeline)
- 00:40, 13 August 2009 (hist) (diff) Building Peptide Atlas (→Outline of new pipeline)
- 23:25, 12 August 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 23:24, 12 August 2009 (hist) (diff) Building Peptide Atlas (→Combining all experiments using iProphet: pipeline in use Nov. '08 through Feb. '09)
- 23:24, 12 August 2009 (hist) (diff) Building Peptide Atlas (→Load the reference DB (biosequence set) if new one was created)
- 23:22, 12 August 2009 (hist) (diff) Building Peptide Atlas (→Load the reference DB (biosequence set) if new one is needed)
- 23:21, 12 August 2009 (hist) (diff) Building Peptide Atlas (→Run PeptideAtlas build "pipeline")
- 23:10, 12 August 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 22:53, 12 August 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 22:48, 12 August 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 22:45, 12 August 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 22:43, 12 August 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 21:19, 12 August 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 19:24, 7 August 2009 (hist) (diff) Terry's compbio links (→General computational biology stuff)
- 18:51, 7 August 2009 (hist) (diff) Terry's compbio links (→General computational biology stuff)
- 18:51, 7 August 2009 (hist) (diff) Terry's compbio links (→General computational biology stuff)
- 17:22, 4 August 2009 (hist) (diff) Software:Mayu (top)
- 19:59, 31 July 2009 (hist) (diff) Terry's compbio links
- 19:59, 31 July 2009 (hist) (diff) Terry's compbio links
- 01:21, 19 July 2009 (hist) (diff) Mayu (top)
- 00:38, 19 July 2009 (hist) (diff) Terry's compbio links (→Proteomics stuff)
- 00:36, 19 July 2009 (hist) (diff) Software:Mayu (→Mayu)
- 00:31, 19 July 2009 (hist) (diff) Software:TPP (→Probability Assignment and Validation)
- 00:12, 19 July 2009 (hist) (diff) Mayu
- 00:09, 19 July 2009 (hist) (diff) Mayu
- 23:55, 18 July 2009 (hist) (diff) Mayu
- 21:49, 16 July 2009 (hist) (diff) Mayu
- 21:46, 16 July 2009 (hist) (diff) Terry's compbio links (→Proteomics stuff)
- 00:21, 15 July 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 19:06, 9 July 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 17:42, 8 July 2009 (hist) (diff) Expert search and TPP usage (→Data storage)
- 17:39, 8 July 2009 (hist) (diff) Expert search and TPP usage (→checking your results)
- 17:38, 8 July 2009 (hist) (diff) Expert search and TPP usage (→checking your results)
- 17:32, 8 July 2009 (hist) (diff) Expert search and TPP usage (→checking your results)
- 16:58, 8 July 2009 (hist) (diff) Expert search and TPP usage (→Search and TPP)
- 18:18, 6 July 2009 (hist) (diff) TPP testimonials (top)
- 17:14, 6 July 2009 (hist) (diff) TPP testimonials
- 17:13, 6 July 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 18:04, 1 July 2009 (hist) (diff) Terry's compbio links (→Proteomics stuff)
- 20:53, 29 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 20:53, 29 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 20:32, 29 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 21:20, 23 June 2009 (hist) (diff) Using SBEAMS (→Augmenting SBEAMS schema: adding tables or columns) (top)
- 19:09, 22 June 2009 (hist) (diff) m Using SBEAMS (→Filling in manageable tables)
- 19:09, 22 June 2009 (hist) (diff) Using SBEAMS (→Filling in manageable tables)
- 19:09, 22 June 2009 (hist) (diff) Using SBEAMS (→Filling in manageable tables)
- 16:53, 19 June 2009 (hist) (diff) Building Peptide Atlas (→Calculate chromosomal coordinates)
- 16:41, 19 June 2009 (hist) (diff) m Building Peptide Atlas (→Run PeptideAtlas build "pipeline")
- 00:18, 19 June 2009 (hist) (diff) PeptideAtlas software (top)
- 00:13, 19 June 2009 (hist) (diff) PeptideAtlas software (→Creating ("building") a PeptideAtlas build)
- 00:11, 19 June 2009 (hist) (diff) PeptideAtlas software
- 00:11, 19 June 2009 (hist) (diff) PeptideAtlas software
- 00:02, 19 June 2009 (hist) (diff) PeptideAtlas software (→Creating ("building") a PeptideAtlas build)
- 21:56, 18 June 2009 (hist) (diff) PeptideAtlas software
- 21:55, 18 June 2009 (hist) (diff) PeptideAtlas software
- 21:49, 18 June 2009 (hist) (diff) Building Peptide Atlas (→Combining all experiments using iProphet: pipeline in use Nov. '08 through Feb. '09)
- 21:48, 18 June 2009 (hist) (diff) PeptideAtlas software (→Loading a PeptideAtlas build)
- 21:39, 18 June 2009 (hist) (diff) PeptideAtlas software (→Creating ("building" a PeptideAtlas build)
- 21:38, 18 June 2009 (hist) (diff) PeptideAtlas software
- 21:33, 18 June 2009 (hist) (diff) PeptideAtlas software
- 21:28, 18 June 2009 (hist) (diff) Terry's compbio links
- 21:28, 18 June 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 20:55, 18 June 2009 (hist) (diff) Building Peptide Atlas (→Make a list of unmappable peptides)
- 20:54, 18 June 2009 (hist) (diff) Building Peptide Atlas (→Run PeptideAtlas build "pipeline")
- 20:50, 18 June 2009 (hist) (diff) Building Peptide Atlas (→Run PeptideAtlas build "pipeline".)
- 20:36, 18 June 2009 (hist) (diff) Building Peptide Atlas (→Map peptides to reference DB)
- 18:11, 17 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 19:53, 16 June 2009 (hist) (diff) Building Peptide Atlas
- 19:52, 16 June 2009 (hist) (diff) Building Peptide Atlas
- 19:51, 16 June 2009 (hist) (diff) Building Peptide Atlas
- 19:50, 16 June 2009 (hist) (diff) PeptideAtlas software (→Loading PeptideAtlas)
- 19:49, 16 June 2009 (hist) (diff) PeptideAtlas software (→Loading PeptideAtlas)
- 19:49, 16 June 2009 (hist) (diff) PeptideAtlas software (→Loading PeptideAtlas)
- 19:48, 16 June 2009 (hist) (diff) PeptideAtlas software
- 19:40, 16 June 2009 (hist) (diff) Building Peptide Atlas
- 18:03, 16 June 2009 (hist) (diff) Using SBEAMS
- 17:47, 16 June 2009 (hist) (diff) Using SBEAMS (→Filling in manageable tables)
- 00:57, 16 June 2009 (hist) (diff) Using SBEAMS (→Filling in manageable tables)
- 00:54, 16 June 2009 (hist) (diff) Using SBEAMS (→Augmenting SBEAMS schema)
- 20:19, 15 June 2009 (hist) (diff) Using SBEAMS
- 19:17, 15 June 2009 (hist) (diff) Using SBEAMS
- 19:08, 15 June 2009 (hist) (diff) Using SBEAMS (→To query SBEAMS directly)
- 19:06, 15 June 2009 (hist) (diff) Using SBEAMS (→Miscellaneous useful SQL queries)
- 19:01, 15 June 2009 (hist) (diff) Using SBEAMS
- 18:58, 15 June 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 18:15, 15 June 2009 (hist) (diff) Building Peptide Atlas (→Combining all experiments using iProphet: pipeline in use Nov. '08 through Feb. '09)
- 18:14, 15 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 18:13, 15 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 18:13, 15 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 18:11, 15 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 18:10, 15 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 17:25, 15 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 17:23, 15 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 01:41, 11 June 2009 (hist) (diff) Expert search and TPP usage (→X!Tandem-K)
- 01:40, 11 June 2009 (hist) (diff) Expert search and TPP usage (→X!Tandem-K)
- 01:39, 11 June 2009 (hist) (diff) Expert search and TPP usage
- 01:35, 11 June 2009 (hist) (diff) Expert search and TPP usage (→Experimental Generic Search Parameters File)
- 01:34, 11 June 2009 (hist) (diff) Expert search and TPP usage (→Experimental Generic Search Parameters File)
- 01:33, 11 June 2009 (hist) (diff) Expert search and TPP usage
- 01:19, 11 June 2009 (hist) (diff) Expert search and TPP usage (→X!Tandem-K)
- 01:16, 11 June 2009 (hist) (diff) Expert search and TPP usage (→Searching)
- 21:37, 9 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 18:49, 9 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 18:46, 9 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 18:33, 9 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 18:22, 9 June 2009 (hist) (diff) Building Peptide Atlas (→Combining all experiments using iProphet: pipeline in use Dec. '08 through Feb. '09)
- 18:12, 9 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: don't combine experiments using iProphet; generate more informative protein lists)
- 18:11, 9 June 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: don't combine experiments using iProphet; generate more informative protein lists)
- 18:09, 9 June 2009 (hist) (diff) Building Peptide Atlas (→December 2008 pipeline: combining all experiments using iProphet)
- 18:05, 9 June 2009 (hist) (diff) Building Peptide Atlas (→December 2008 pipeline: combining all experiments using iProphet)
- 21:57, 29 May 2009 (hist) (diff) PABST peptide examples
- 17:13, 27 May 2009 (hist) (diff) PABST peptide examples (formatting changes)
- 17:10, 27 May 2009 (hist) (diff) PABST peptide examples
- 16:45, 27 May 2009 (hist) (diff) Building Peptide Atlas (→Load data)
- 16:44, 27 May 2009 (hist) (diff) Building Peptide Atlas (→Load data)
- 16:44, 27 May 2009 (hist) (diff) Building Peptide Atlas (→Load data)
- 04:54, 22 May 2009 (hist) (diff) Building Peptide Atlas (→Download latest fasta files from web for reference DB (also called biosequence set))
- 17:59, 20 May 2009 (hist) (diff) m Building Peptide Atlas
- 17:58, 20 May 2009 (hist) (diff) m Building Peptide Atlas (→May 2009 pipeline: don't combine experiments using iProphet; generate more informative protein lists)
- 03:55, 20 May 2009 (hist) (diff) m TPP Tutorial v2 (→6. Validation of Peptide-Spectrum assignments with PeptideProphet)
- 23:18, 19 May 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: don't combine experiments using iProphet; generate more informative protein lists)
- 22:58, 19 May 2009 (hist) (diff) m Building Peptide Atlas (→Download latest fasta files from web for reference DB (also called biosequence set))
- 21:03, 19 May 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: don't combine experiments using iProphet; generate more informative protein lists)
- 21:01, 19 May 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: don't combine experiments using iProphet; generate more informative protein lists)
- 21:00, 19 May 2009 (hist) (diff) Building Peptide Atlas (→May 2009 pipeline: generate more informative protein lists)
- 20:59, 19 May 2009 (hist) (diff) Building Peptide Atlas
- 16:39, 4 May 2009 (hist) (diff) m Processing glycopeptide data (→Notes on how to analyze)
- 02:25, 23 April 2009 (hist) (diff) m Processing glycopeptide data (→Notes on how to analyze)
- 02:15, 23 April 2009 (hist) (diff) Processing glycopeptide data (→Notes on how to analyze)
- 02:03, 23 April 2009 (hist) (diff) Processing glycopeptide data (→Notes on how to analyze)
- 21:58, 22 April 2009 (hist) (diff) Processing glycopeptide data (→Notes on how to analyze)
- 23:24, 21 April 2009 (hist) (diff) Processing glycopeptide data (→Notes on how to analyze)
- 19:47, 13 April 2009 (hist) (diff) Building Peptide Atlas
- 19:45, 13 April 2009 (hist) (diff) Building Peptide Atlas
- 21:44, 9 April 2009 (hist) (diff) Processing glycopeptide data (→Outline of analysis procedure)
- 23:48, 31 March 2009 (hist) (diff) Building Peptide Atlas (→Map peptides to reference DB)
- 23:47, 31 March 2009 (hist) (diff) m Building Peptide Atlas (→Gather peptides and update probabilities)
- 23:46, 31 March 2009 (hist) (diff) Building Peptide Atlas (→Gather peptides and update probabilities)
- 19:09, 31 March 2009 (hist) (diff) Building Peptide Atlas (→Register projects and experiments using SBEAMS interface.)
- 20:48, 27 March 2009 (hist) (diff) Terry's compbio links (→General programming stuff)
- 20:44, 25 March 2009 (hist) (diff) Terry's compbio links (→General programming stuff)
- 20:40, 25 March 2009 (hist) (diff) Terry's compbio links (→General programming stuff)
- 21:05, 17 March 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 23:33, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 19:52, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 19:43, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 18:13, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Gather peptides and update probabilities)
- 18:12, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Gather all peptides and update probabilities)
- 18:02, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Gather all peptides and update probabilities)
- 18:02, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Gather all peptides and update probabilities)
- 18:00, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 17:58, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 17:58, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 17:50, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 17:47, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Download latest fasta files from web for reference DB (also called biosequence set))
- 17:46, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Download latest fasta files from web for reference DB (also called biosequence set))
- 17:46, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Gather all peptides and update probabilities)
- 17:44, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Make a list of unmappable peptides)
- 17:39, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Make a list of unmappable peptides)
- 17:36, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Parse the mapping results and calculate chromosomal coordinates)
- 17:35, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Read results of previous step, print it out in a different format, and count unique peptides)
- 17:35, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Find match for each peptide in reference DB and get start and end coordinates of aligned region)
- 17:33, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Parse the mapping results and calculate chromosomal coordinates)
- 17:25, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Find match for each peptide in reference DB and get start and end coordinates of aligned region)
- 17:24, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Read results of previous step, print it out in a different format, and count unique peptides)
- 17:16, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Find match for each peptide in reference DB and get start and end coordinates of aligned region)
- 17:16, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Read results of previous step, print it out in a different format, and count unique peptides)
- 17:15, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Find match for each peptide in reference DB and get start and end coordinates of aligned region)
- 17:15, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Align peptides with reference proteins and calculate coordinates (start/end points of aligned region))
- 17:07, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Find match for each peptide in reference DB and get start and end coordinates of aligned region)
- 17:06, 13 March 2009 (hist) (diff) Building Peptide Atlas (→BLAST peptides against reference DB)
- 17:04, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Align peptides with reference proteins and calculate coordinates (start/end points of aligned region))
- 16:58, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Align peptides with reference proteins and calculate coordinates (start/end points of aligned region))
- 16:56, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Gather all peptides and update probabilities)
- 16:54, 13 March 2009 (hist) (diff) Building Peptide Atlas (→BLAST peptides against reference DB)
- 16:53, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Download latest fasta files from web for reference DB (also called biosequence set))
- 00:27, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Align peptides with reference proteins and calculate coordinates (start/end points of aligned region))
- 00:27, 13 March 2009 (hist) (diff) Building Peptide Atlas (→Parse the mapping results and calculate chromosomal coordinates)
- 00:27, 13 March 2009 (hist) (diff) Building Peptide Atlas (→?Align peptides with reference proteins and calculate coordinates (start/end points of aligned region?))
- 00:24, 13 March 2009 (hist) (diff) Building Peptide Atlas (→BLAST peptides against reference DB)
- 00:19, 13 March 2009 (hist) (diff) Building Peptide Atlas
- 23:44, 12 March 2009 (hist) (diff) Building Peptide Atlas
- 23:38, 12 March 2009 (hist) (diff) Building Peptide Atlas (→Get chromosomal coordinates)
- 23:38, 12 March 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 23:35, 12 March 2009 (hist) (diff) Building Peptide Atlas (→Map peptides to proteins in reference DB)
- 23:23, 12 March 2009 (hist) (diff) Building Peptide Atlas (→Download latest fasta files from web for reference DB (also called biosequence set))
- 23:22, 12 March 2009 (hist) (diff) Building Peptide Atlas (→Gather all peptides and update probabilities)
- 23:21, 12 March 2009 (hist) (diff) Building Peptide Atlas (→Build a SpectraST library from the build)
- 23:20, 12 March 2009 (hist) (diff) Building Peptide Atlas (→Download latest fasta files from web for reference DB (also called biosequence set))
- 22:40, 12 March 2009 (hist) (diff) Expert search and TPP usage (→Preparation)
- 18:42, 12 March 2009 (hist) (diff) Terry's compbio links (→General programming stuff)
- 17:31, 12 March 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 18:20, 11 March 2009 (hist) (diff) Bash/tcsh syntax differences (→setting environment variables) (top)
- 18:00, 9 March 2009 (hist) (diff) Expert search and TPP usage
- 17:58, 9 March 2009 (hist) (diff) The ISB Unix user's expert guide to tandem MS sequence searching and TPP usage (The ISB Unix user's expert guide to tandem MS sequence searching and TPP usage moved to Expert search and TPP usage: Old title too lengthy) (top)
- 17:58, 9 March 2009 (hist) (diff) m Expert search and TPP usage (The ISB Unix user's expert guide to tandem MS sequence searching and TPP usage moved to Expert search and TPP usage: Old title too lengthy)
- 17:55, 9 March 2009 (hist) (diff) Expert search and TPP usage (Added Eric's latest notes on how to run each search)
- 00:16, 5 March 2009 (hist) (diff) Terry's compbio links
- 00:15, 5 March 2009 (hist) (diff) Terry's compbio links
- 00:50, 21 February 2009 (hist) (diff) Processing glycopeptide data
- 23:21, 20 February 2009 (hist) (diff) Processing glycopeptide data
- 22:54, 20 February 2009 (hist) (diff) Processing glycopeptide data
- 22:23, 20 February 2009 (hist) (diff) Processing glycopeptide data
- 22:11, 20 February 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 04:16, 14 February 2009 (hist) (diff) Expert search and TPP usage
- 00:06, 14 February 2009 (hist) (diff) Expert search and TPP usage (→Data storage)
- 17:50, 9 February 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 17:49, 9 February 2009 (hist) (diff) Terry's compbio links (→ISB specific stuff)
- 01:46, 6 February 2009 (hist) (diff) Terry's compbio links (→General programming stuff)
- 21:51, 30 January 2009 (hist) (diff) Terry's compbio links
- 21:50, 28 January 2009 (hist) (diff) Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 22:15, 26 January 2009 (hist) (diff) Building Peptide Atlas (→Map peptides to proteins in reference DB)
- 22:15, 26 January 2009 (hist) (diff) Building Peptide Atlas (→Build a SpectraST library from the build)
- 22:14, 26 January 2009 (hist) (diff) Building Peptide Atlas (→Map peptides to proteins in reference DB)
- 20:47, 26 January 2009 (hist) (diff) m Building Peptide Atlas (→Copy recipe and follow it)
- 20:46, 26 January 2009 (hist) (diff) m Building Peptide Atlas
- 20:46, 26 January 2009 (hist) (diff) Building Peptide Atlas
- 20:42, 26 January 2009 (hist) (diff) m Building Peptide Atlas
- 20:41, 26 January 2009 (hist) (diff) m Building Peptide Atlas (→Start with one or PeptideProphet output files (pepXML) for each experiment in each project.)
- 20:41, 26 January 2009 (hist) (diff) Building Peptide Atlas (→Register projects and experiments using SBEAMS interface.)
- 19:54, 26 January 2009 (hist) (diff) Building Peptide Atlas (→Register projects and experiments using SBEAMS interface.)
- 19:41, 26 January 2009 (hist) (diff) Building Peptide Atlas (→Register projects and experiments using SBEAMS interface.)
- 20:51, 23 January 2009 (hist) (diff) Terry's compbio links (→General programming stuff)
- 20:27, 23 January 2009 (hist) (diff) Expert search and TPP usage (→Data storage)
- 20:23, 23 January 2009 (hist) (diff) m Expert search and TPP usage (→Data storage)
- 20:22, 23 January 2009 (hist) (diff) Expert search and TPP usage (→Searching)
- 18:43, 23 January 2009 (hist) (diff) Expert search and TPP usage
- 18:07, 23 January 2009 (hist) (diff) Expert search and TPP usage
- 22:34, 22 January 2009 (hist) (diff) Bash/tcsh syntax differences
- 22:26, 22 January 2009 (hist) (diff) Terry's compbio links (→General programming stuff)
- 22:26, 22 January 2009 (hist) (diff) Terry's compbio links (→A few other Links)
- 22:26, 22 January 2009 (hist) (diff) Terry's compbio links (→A few other Links)
- 21:23, 22 January 2009 (hist) (diff) Terry's compbio links (→A few other Links)
- 19:24, 22 January 2009 (hist) (diff) m Building Peptide Atlas (→Start with one or more pepXML search results files for each experiment in each project.)
- 19:23, 22 January 2009 (hist) (diff) m Building Peptide Atlas
- 18:09, 22 January 2009 (hist) (diff) m Building Peptide Atlas (→Compile statistics on the peptides and proteins in the build)
- 18:07, 22 January 2009 (hist) (diff) Building Peptide Atlas (→Load data into build)
- 18:06, 22 January 2009 (hist) (diff) Building Peptide Atlas (→Gather all peptides and update probabilities)
- 02:49, 21 January 2009 (hist) (diff) m Building Peptide Atlas (→Gather all peptides and update probabilities)
- 02:15, 21 January 2009 (hist) (diff) m Building Peptide Atlas
- 02:14, 21 January 2009 (hist) (diff) Building Peptide Atlas (→Gather all peptides and update probabilities)
- 02:07, 21 January 2009 (hist) (diff) Building Peptide Atlas (→Combine ''all'' pepXML files for project using iProphet, then run ProteinProphet)
- 02:02, 21 January 2009 (hist) (diff) m Building Peptide Atlas (→If you ran multiple search engines for each experiment, combine ''per experiment'' using iProphet.)
- 02:00, 21 January 2009 (hist) (diff) Building Peptide Atlas (recommend search against decoys)
- 01:57, 21 January 2009 (hist) (diff) m Building Peptide Atlas (→Build a SpectraST library from the build (optional))
- 01:56, 21 January 2009 (hist) (diff) m Building Peptide Atlas (→Start with one or more pepXML files for each experiment in each project.)
- 01:56, 21 January 2009 (hist) (diff) m Building Peptide Atlas (→Start with one or more pepXML files for each experiment in each project.)
- 01:55, 21 January 2009 (hist) (diff) m Building Peptide Atlas (→Gather all peptides and update probabilities)
- 19:47, 16 January 2009 (hist) (diff) Terry's compbio links (→General programming stuff)
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