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- TPP:4.5.0 Release Notes (8358 bytes)
1: '''Trans-Proteomic Pipeline (TPP) "Rapture" 4.5.0 Release Notes'''
3: ...r). For advanced users who need to customize the TPP, or for those who run high-throughput experiments...
5: ...'Current release notes are available at [[TPP:4.6.0_Release_Notes]]''<br>
6: ...Previous release notes are available at [[TPP:4.4.1_Release_Notes]]''
10: * New iModelParser.cgi tpp; fpr viewing iProphet models. - TPP:4.5.1 Release Notes (4270 bytes)
2: '''Trans-Proteomic Pipeline (TPP) "Rapture" 4.5.1 Release Notes'''
4: ...r). For advanced users who need to customize the TPP, or for those who run high-throughput experiments...
6: ...Previous release notes are available at [[TPP:4.5.0_Release_Notes]]''
21: ...if all files in same dir (shorten command line) [xinteract only at the moment]
27: ...n checking; warn users if using an old version of TPP - TPP:4.7.1 Release Notes (5613 bytes)
2: ...r). For advanced users who need to customize the TPP, or for those who run high-throughput experiments...
4: ...Previous release notes are available at [[TPP:4.7.0_Release_Notes]]''
19: * Upgraded ''Comet'' to 2014.01 rev. 0
23: ...rely used) advanced options for ProteinProphet in xinteract page
43: ** Attempt to run ''tpp_models'' if no MODELS file found - TPP:5.0.0 Release Notes (17167 bytes)
1: ...r). For advanced users who need to customize the TPP, or for those who run on Linux or OS X, you can d...
3: For installation help, please see [[TPP:5.0_Installation]].
6: ...Previous release notes are available at [[TPP:4.8.0_Release_Notes]]''
16: ...tand-alone '''Apache''' web server (uses port 10401, user configurable), Strawberry '''perl''', and '...
18: ...Tray application provides convenient shortcuts to TPP, web server control, and data and log folders - TPP:5.1.0 Release Notes (19616 bytes)
1: ...r). For advanced users who need to customize the TPP, or for those who run on Linux or OS X, you can d...
3: For installation help, please see [[TPP:5.1_Installation]].
6: ...Previous release notes are available at [[TPP:5.0.0_Release_Notes]]''
19: * New tool '''ploTPP''' for simple interactive visualization, includin...
27: ** Extracts files and can create a TPP/Petunia session file for ease of (re-)analysis an... - TPP:5.2.0 Release Notes (15364 bytes)
1: ...r). For advanced users who need to customize the TPP, or for those who run on Linux or OS X, you can d...
3: For installation help, please see [[TPP:5.2_Installation]].
6: ...Previous release notes are available at [[TPP:5.1.0_Release_Notes]]''
12: * New '''tpp2mzid''', a new tool for converting PepXML and Pro...
38: ** Expanded UI support for up to 12 channels - TPP:6.0.0 Release Notes (38799 bytes)
1: ...r). For advanced users who need to customize the TPP, or for those who run on Linux or OS X, you can d...
3: For installation help, please see [[TPP:5.2_Installation]] (same as for 6.0.0)
6: ...Previous release notes are available at [[TPP:5.2.0_Release_Notes]]''
12: * Added new TPP '''"Landing" page''' for local installation
13: ** Mostly links to local TPP interfaces, external resources, release notes, an... - TPP:6.1.0 Release Notes (11384 bytes)
1: ...r). For advanced users who need to customize the TPP, or for those who run on Linux or OS X, you can d...
3: ...lease see [[TPP:5.2_Installation]] (same as for 6.1.0)
6: ...Previous release notes are available at [[TPP:6.0.0_Release_Notes]]''
11: ...en-mass and adduct identification (v 1.0.0. alpha 7)
19: * ''xinteract'' - TPP:6.2.0 Release Notes (15394 bytes)
1: ...r). For advanced users who need to customize the TPP, or for those who run on Linux or OS X, you can d...
3: ...lease see [[TPP:5.2_Installation]] (same as for 6.1.0)
6: ...Previous release notes are available at [[TPP:6.1.0_Release_Notes]]''
12: * ''Comet'' version 2023.01.0 (with Makefiles corrected)
14: * ''ProteoWizard'' version 3.0.22340 [77d5bfc] (Note updated licenses) - TPP:6.3.0 Release Notes (8953 bytes)
2: ''Next release notes are available at [[TPP:7.0.0_Release_Notes]]''
4: ...erver). For advanced users who need to customize TPP, or for those who run on Linux or OS X, you can d...
6: '''Versions 6.3.1 and 6.3.2 address bugfixes to PTMProphet. Please...
10: For installation help, please see [[TPP:5.2_Installation]] (same as for 6.2.0)
13: ...Previous release notes are available at [[TPP:6.2.0_Release_Notes]]'' - TPP:7.1.0 Release Notes (5822 bytes)
1: = TPP 7.1.0 ALBEDO Release Notes =
4: ...s.proteomecenter.org/wiki/index.php?title=TPP:7.1.0_Release_Notes#.5BInteractParser:.5D InteractParser]] option '''...
9: ...py of the current TPP ProtXMLViewer.pl file: '''$(TPP_HOME)/cgi-bin/ProtXMLViewer.pl'''
13: * Use icons to differentiate the different TPP pages, should help those of us with millions of o...
17: * fix issue with Forbidden Access to /tpp on the webserver
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