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  1. Software:XLink (3210 bytes)
    1: [[Image:XLink Viewer.jpg|thumb|right]]
    8: ...ed from the command line, and the java program '''XLinkViewer'''.
    13: ===iXLINK===
    14: ...d to generate a preliminary sequence assignment. iXLINK also creates mass inclusion lists for subsequent ...
    16: ===doXLINK===

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  1. Software:Overview (3074 bytes)
    1: ...cs tools, many of which are integrated into the [[Software:TPP|TPP]] project.
    5: '''Please see the [[Software:TPP|TPP page]] for descriptions of the pipeline a...
    7: The TPP software distribution integrates the following programs:
    9: ...mary]], [[Software:MzXML2Search|MzXML2Search]], [[Software:MsXML2Other|MsXML2Other]],
    10: [[Software:readmzXML|readmzXML]], [[Software:mzStar|mzStar]]
  2. Software:XLink (3210 bytes)
    1: [[Image:XLink Viewer.jpg|thumb|right]]
    8: ...ed from the command line, and the java program '''XLinkViewer'''.
    13: ===iXLINK===
    14: ...d to generate a preliminary sequence assignment. iXLINK also creates mass inclusion lists for subsequent ...
    16: ===doXLINK===
  3. TPP:5.1.0 SVN Log (66940 bytes)
    50: - align xl xlink peptides and show xl location with a bar connecti...
    51: - fix text/excel export of loop xlink peptides, Format is as:
    52: K.FC[160.03]KFIKSMR.A(3+6) <-- xlink loop positions
    313: Bring your software dreams to reality with the simple object interfac...
    397: [PepXMLViewer] Allow filtering by xlink_type if column is being displayed (or serach engi...
  4. TPP:5.1.0 Release Notes (19616 bytes)
    1: ...nstalls and configures the TPP and other required software (such as a web server). For advanced users who n...
    156: ** Allow filtering by xlink_type if column is being displayed (or search engi...
    315: ** Fixed text/excel export of loop xlink peptides
    402: = Getting the TPP Software =
    411: * For guides to installing and using our software, please see our wiki:
  5. TPP:6.0.0 Release Notes (38799 bytes)
    1: ...nstalls and configures the TPP and other required software (such as a web server). For advanced users who n...
    454: ** Add xlink type to link to models page
    579: ** Updating software to work with the newer mzIMLTools API
    655: = Getting the TPP Software =
    664: * For guides to installing and using our software, please see our wiki:
  6. TPP:6.2.0 Release Notes (15394 bytes)
    1: ...nstalls and configures the TPP and other required software (such as a web server). For advanced users who n...
    64: ...d support for linking to separate MS3 spectra for xlink data. Separate Lorikeet links show up as "[spectA...
    284: = Getting the TPP Software =
    293: * For guides to installing and using our software, please see our wiki:
    294: ...p://tools.proteomecenter.org/wiki/index.php?title=Software:TPP

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