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- TPP:V5Feedback (11460 bytes)
7: ** go through the current pages and update/remove them
20: ... as expected when run from command shell or add/remove programs.''
74: * <s>Can't remove mzML files from processing search form</s>
113: ...ile, is that in bin? If so it should have been removed.
156: * Move tools params from /conf to data/param(eter)s/ - Prequips:FAQ (1189 bytes)
33: # It's recommended to move mzXML files to the local hard disk and load them ... - TPP:Directory Layout (1000 bytes)
26: refresh_interact: empty directory, to be deleted (moved to CVS attic)
47: ...oot\isb-bin\images: ?? tpp_gui images; eventually move to ISB\html\images?
49: ...pub\tpp-bin\images: ?? tpp_gui images; eventually move to ISB\html\images?
51: ...etpub\tpp-bin\users: ?? tpp_gui users: eventually move somewhere else? - TPP:Mascot and the TPP (957 bytes)
17: * When the search is complete, move the MASCOT output file (*.dat) back to the direct... - TPP Tutorial v1 (43187 bytes)
56: cd change directory; cd .. moves you backwards to the next higher subdirectory le...
60: mv moves a file to a different directory
135: '''Move the dbase folder to C:\Inetpub\wwwroot using wind...
254: ...s. Leave the probability filter at 0.05. This removes some of the very poor search results and makes t... - Expert search and TPP usage (12929 bytes)
11: ...is disk is nearly full and new data should not be moved there -- still true July 2009)''':
22: ...hardcoded within pepXML and protXML files. If you move these files, you must run the following script in... - TPP:Installing on Ubuntu 8.10 (3812 bytes)
51: ...ver, it is the default compiler on intrepid. To remove errors/warnings, I changed default g++ version to...
63: * Move to src/ directory. <pre> $ cd trans_proteomic_pip... - Building Peptide Atlas (26978 bytes)
18: ... same level in the directory tree. If you have to move files to achieve this, adjust the paths within th...
309: ...reference database) before atlas build process. Remove this task from step03. Get rid of SUPPLEMENTAL_PR...
310: * Remove references to multiply-observed peptides on summa... - TPP:Building Windows-native binaries with Visual Studio 2005 (3001 bytes)
3: ...er) and the Visual Studio project files will be removed with the release of TPP 5.0.
25: ...it is ready, all of the developers have agreed to move to this build tool. - TPP Tutorial v2 (15736 bytes)
25: * Copy or move the ''yeast_orfs_all_REV.20060126.short.fasta'' f...
26: * Copy or move the two data files (''OR20080317_S_SILAC-LH_1-1_0...
77: ...st''' (which you will need to create). Now we can move on to searching these data:
92: ... edit the selections using the checkboxes and ''Remove'' button on the right-hand side.
113: ... edit the selections using the checkboxes and ''Remove'' button on the right-hand side. - Custom digest site (3924 bytes)
16: * Move to the src directory and open the file '''src/Enz...
76: * Now move back to the '''src''' directory and compile TPP a... - Msconvert Wine (11104 bytes)
53: ...th the tar.bz2 extension. Extract the package and move it to wherever you want to install it.
145: ...mmand(s), stop the user's wine server, and then remove the temporary prefix. - TPP:Installing the Trans-Proteomic Pipeline (TPP) 4.4.0 on Mac OS X 10.6.4 (12202 bytes)
83: ...lled TPP-4.4.0 in your default download location. Move the folder to your home directory. - TPP:4.5.1 SVN Log (9734 bytes)
7: ...the end of the spectrum name that are now being removed.
46: Move RefreshParser ahead of PeptideProphet to safeguar...
97: ...spectrum size in these cases, hence the overrun). Moved stdint.h to linux build as it is not part of Vis... - ReleasePlanning (12743 bytes)
52: * Remove unneeded executables (add to this list!) :
125: ...it was calls to tpp_hostname (via tpplib_perl); removed those and now it is lightning fast!''
160: ** EXCELPEPS appears to be broken; just remove it?
199: * Move /tmp/ directory under tpp-bin (Windows) - TPP SEWW Demo2012 (29568 bytes)
34: Move ''createparamfile-0.5-SNAPSHOT.jar'' into ''$WEBS...
66: * Copy or move the ''yeast_orfs_all_REV.20060126.short.fasta'' f...
67: * Copy or move the two data files (''OR20080317_S_SILAC-LH_1-1_0...
234: * Move the window that appears and note that that the to...
297: ...hat ''createparamfile-0.5-SNAPSHOT.jar'' has been moved into ''WEBSERVER_ROOT\..\tpp-bin'' (by default '... - TPP WISB Demo2012 (16916 bytes)
32: Move ''createparamfile-1.0-SNAPSHOT.jar'' into ''$WEBS...
50: * Copy or move the ''yeast_orfs_all_REV.20060126.short.fasta'' f...
51: * Copy or move the two data files (''OR20080317_S_SILAC-LH_1-1_0... - TPP:4.5.2 Release Notes (4692 bytes)
19: ...tempting to convert, and suggest using msconvert; Move such page to a less prominent place in tab menu; ... - TPP:4.5.2 SVN Log (7911 bytes)
145: ...tempting to convert, and suggest using msconvert; Move such page to a less prominent place in tab menu; ... - TPP:4.5.0 SVN Log (242349 bytes)
88: system and removed after the service is completed. This is done to
90: ignored for the timeout but instead is just removed.
119: ... problem with latest version of Myrimatch which removed some scores in the reports.
132: ... problem with latest version of Myrimatch which removed some scores in the reports.
258: Moved msconvert/pwiz files to its own file. Updated t...
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