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- TPP:Developer Documentation (23931 bytes)
430: ;u : do not assemble protein groups in ProteinProphet analysis
500: ;u: do not assemble PROTEIN GROUPS - TPP:Frequently Asked Questions (5647 bytes)
57: ...ctools-discuss, hosted on google groups at http://groups.google.com/group/spctools-discuss . All TPP user...
59: ... the low-volume list spctools-announce, at http://groups.google.com/group/spctools-announce , for importan...
64: Occasionally, in a discussion on [http://groups.google.com/group/spctools-discuss spctools-discus... - Software:PeptideProphet (1728 bytes)
8: ...rd by which the results of different experimental groups can be compared. - Software:ProteinProphet (6941 bytes)
50: ==Protein groups==
52: Proteins are clustered into groups within the protXML element <protein group>. Usual...
56: ...re protein grouping will take place and the fewer groups you will get. MININDEP sets the minimum amount of... - Formats:mzXML (9722 bytes)
126: ...instrument vendors, and other proteomics software groups. It is intended and expected that mzML will repla... - Software:SpectraST (70083 bytes)
9: ...of this powerful technique to only those research groups that can afford the costly computational infrastr...
794: ...com/group/spctools-discuss spctools-discuss.googlegroups.com]
796: ...m/group/spctools-announce spctools-announce.googlegroups.com]
805: ...com/group/spctools-discuss spctools-discuss.googlegroups.com]
806: ...m/group/spctools-announce spctools-announce.googlegroups.com] - TPP Tutorial v1 (43187 bytes)
258: ...rd by which the results of different experimental groups can be compared [[TPP_Tutorial#1|(1)]]. - Software:SuperHirn (11737 bytes)
27: ...://groups.google.com/group/superhirn?hl=en Google Groups "SuperHirn" ].
163: ... how many number of profile trends (or biological groups) you expect from your data || || - - TPP:4.2.0 Release Notes (4364 bytes)
14: many more proteins will appear in groups because any network of - TPP Tutorial v2 (15736 bytes)
150: ...ed in descending order by Probability so that the groups at the top of the page are the most confident ide... - Msconvert Capabilities (15313 bytes)
152: Protein groups identified at FDR 0.01=0
199: Protein groups identified at FDR 0.01=0
267: Protein groups identified at FDR 0.01=8
322: Protein groups identified at FDR 0.01=9 - TPP:4.4.0 Release Notes (31941 bytes)
408: ...display ratios of secondary proteins from protein groups. TODO: Next and Prev Protein buttons will take yo...
412: ...display ratios of secondary proteins from protein groups. - TPP SEWW Demo2012 (29568 bytes)
272: ...ed in descending order by Probability so that the groups at the top of the page are the most confident ide... - TPP WISB Demo2012 (16916 bytes)
239: ...ed in descending order by Probability so that the groups at the top of the page are the most confident ide... - TPP Tutorial (17174 bytes)
163: ...ed in descending order by Probability so that the groups at the top of the page are the most confident ide... - TPP:4.8.0 SVN Log (42174 bytes)
636: describe_security_groups() called with a name parameter and the group
637: doesn't exist. Now just get a list of all the groups and look to see if - TPP:5.0.0 SVN Log (143410 bytes)
2072: [ProtXMLViewer] Fix sorting for very large sub-groups (that go past "az") - TPP:5.0.0 Release Notes (17167 bytes)
209: ** Fix sorting for very large sub-groups (that go past ''az'') - TPP:6.0.0 Release Notes (38799 bytes)
217: ...loat" or "sink" proteins within indistinguishable groups based on user preference (e.g. list DECOY_ entrie...
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