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- TPP:Developer Documentation (23931 bytes)
321: ;-r<num> : change XPRESS residue mass difference (default=9.0)
323: ;-r<num> : change XPRESS residue mass difference (default=9.0)
437: ;-n<str>,<num> : change XPRESS residue mass difference for <str> to <num> (default=9.0)
472: ...cifies that cysteine label has a heavy/light mass difference of 6.0 - TPP:7.0.0 Release Notes (6764 bytes)
25: * fix spectrum flags to know the difference between having an ion mobility associated with th... - Software:XPRESS (1756 bytes)
8: ...ed (such as cysteines for ICAT) and what the mass difference of the two isotope labels are (such as 8 Da for I... - Software:XLink (3210 bytes)
11: ...a doublet - a pair of peaks separated by the mass difference between the heavy and light form of the label. On... - Software:SpectraST (70083 bytes)
409: .... Precursor m/z window is expanded to account for difference between average and monoisotopic mass.||Turn on w...
556: ...epXML import) Exclude spectra with precursor mass difference (absolute value) greater than <thres> Daltons.|| ... - TPP Tutorial v1 (43187 bytes)
226: ...the top score and the second best score, but as a difference between the top score and the score of the first ...
265: '''enter ‘8’ for the first mass difference'''
269: ...labeled (such as cysteines for ICAT) and the mass difference of the two isotope labels (such as 8 Da for old I...
271: ...ifference option unless there is an unusually big difference in the elution time between the light and heavy p...
316: ...utes like the number of tryptic termini, the mass difference of the parent ion, and the number of missed cleav... - Terry's blog (18394 bytes)
46: * '''NTT''' option in PeptideProphet makes a huge difference in the probabilities. - TPP:4.3.0 Release Notes (13496 bytes)
163: ...can methods per cycle, scans were combined; hence difference in chromatogram data points. Cycle summing is no... - ReleasePlanning (12743 bytes)
216: ...r is so fast that I don't think it will make much difference in running time anyway. - TPP SEWW Demo2012 (29568 bytes)
150: ... can be saved as another workflow to capture that difference. - TPP WISB Demo2012 (16916 bytes)
130: ... can be saved as another workflow to capture that difference. - TPP:4.7.0 SVN Log (41695 bytes)
384: ...ck up changes through r57 of Lorikeet code; major difference is the ions labeled in spectrum should improve - TPP:6.0.0 Release Notes (38799 bytes)
66: ** The application reconciles differences in protein grouping that occur among the differe...
225: ...llow PTMProphet in MASSDIFF mode to localize mass differences on sufficient magnitude.
226: ** new Option: STATIC mass difference search option
229: ...ew model ZACCMASS auto adjust for run-to-run mass difference changes
428: ...and "peppro_accmass_runstdev" for run-by-run mass difference calibration - TPP:6.1.0 Release Notes (11384 bytes)
76: ...ess that 1e-12, treat the adduct mass as the mass difference of the PSM for PeptideProphet modelling purposes
127: ** Throw error if smallest mz difference between any 2 channels is less than 2 x specified...
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