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  1. TPP:Frequently Asked Questions (5647 bytes)
    64: ...members to upload files to our ftp site so we can debug issues. The site is at
  2. TPP:Installing on Mac OSX (12870 bytes)
    272: ...ex -lboost_filesystem -lboost_serialization -lm ${DEBUG}
  3. TPP 4.2.1: Installing on Ubuntu 9.04 (4386 bytes)
    103: # Possible values include: debug, info, notice, warn, error, crit,
  4. TPP:Building Windows-native binaries with Visual Studio 2005 (3001 bytes)
    35: ...at you've chosen the correct build configuration: debug or release==
    47: <TPP/src/<configuration> -- either "release" or "debug"
  5. Recipe for generating proteotypic peptides for example database (10354 bytes)
    91: --debug n Set debug flag
  6. PeptideSieveRetrainingTutorial (9535 bytes)
    60: :::''-fparam test.norm.simple -debug 0 -verbose 3 \''<br/>
    75: :::''-priors_npatterns 0 -debug 0 -verbose 3 -verror 0 \''<br/>
    98: :::''-debug 0 -verbose 3 -verror 0 \''<br/>
  7. TPP:4.5.0 SVN Log (242349 bytes)
    60: ...se with more generic functions that are easier to debug and work now.
    1554: * debug print # visible and not visible messages in queue...
    1620: ...nfo messages are now outputted to console (in non-debug format)
    2174: that I can debug things when they go wrong.
    2899: ... M /trunk/trans_proteomic_pipeline/src/tpp_common_debug.vsprops
  8. TPP:4.6.0 SVN Log (19654 bytes)
    37: Taking out some debugging code I had left in
    47: * TPP's makefile has a "xtandem-debug" target that wasn't doing anything.
    48: Fixed this by using the value of DEBUG if its set.
    166: ASAPRatio: Remove debugging output
  9. TPP:5.0.0 SVN Log (143410 bytes)
    470: * make debugging output *NOT* the default in pepxmlviewer
    724: * DEBUG=1 now builds with debugging flags
    725: * make debug for building whole debugging tpp
    1994: tpp_gui: Default debug off
    2017: Comment out DEBUG=1 for now since building with DEBUG flags in mingw-64 msys2 causes g++ to error out w...
  10. TPP:5.0.0 Release Notes (17167 bytes)
    118: ...n datetime; removed debug tab (still available in DEBUG mode)
  11. TPP:5.1.0 SVN Log (66940 bytes)
    28: - Removed some old (commented out) debug code
    541: Separate -g from -DDEBUG for compiling.
    907: - Commented out console debugging string (jquery.flot.js)
    1055: ... Turn on optimization when not being compiled for debugging...
  12. TPP:5.1.0 Release Notes (19616 bytes)
    393: * Removed some old (commented out) debug code and deprecated Cygwin code blocks
  13. TPP:5.2.0 SVN Log (54844 bytes)
    824: [PepXMLViewer] Comment out noisy debugging line
    828: ...ine output with unnecessary noise (it was not the debug line after all...)
  14. TPP:6.2.0 Release Notes (15394 bytes)
    233: ...ed as a result of user exclusion string unless in DEBUG mode

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