Software:Libra
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| * How accurate is the quantitation? | * How accurate is the quantitation? | ||
| + | ==Condition File Generator== | ||
| + | The [http://db.systemsbiology.net/webapps/conditionFileApp Libra condition file generator] is a useful web application. | ||
| ==Authors== | ==Authors== | ||
Revision as of 22:56, 13 April 2007
Contents |
Getting the software
This software is included in the current TPP distribution.
In a nutshell
Libra is a module within the trans-proteomic pipeline to perform quantification on MS/MS spectra that have multi-reagent labeled peptides. More specifically, at ISB we use Libra on MS/MS spectra of iTRAQ labeled samples.
More detail
More detailed information can be found at Sourceforge, including:
- Command line syntax for using Libra
- The condition file
- Details about what Libra does
- How accurate is the quantitation?
Condition File Generator
The Libra condition file generator is a useful web application.
Authors
- Patrick Pedrioli: original code author of Quantitation
- Andrew Keller: peptide assignment to proteins within pipeline
- Nichole King: code maintenance/additions/corrections
