Software:Libra
From SPCTools
(Difference between revisions)
| Revision as of 18:44, 9 April 2007 Jtasman (Talk | contribs) ← Previous diff |
Revision as of 22:37, 9 April 2007 Jtasman (Talk | contribs) Next diff → |
||
| Line 1: | Line 1: | ||
| + | ==Getting the software== | ||
| '''This software is included in the current [[Software:TPP|TPP]] distribution.''' | '''This software is included in the current [[Software:TPP|TPP]] distribution.''' | ||
| + | |||
| + | ==In a nutshell== | ||
| + | Libra is a module within the trans-proteomic pipeline to perform quantification on MS/MS spectra that have multi-reagent labeled peptides. More specifically, at ISB we use Libra on MS/MS spectra of iTRAQ labeled samples. | ||
| + | |||
| + | ==More detail== | ||
| + | More detailed information can be found at [http://sashimi.cvs.sourceforge.net/*checkout*/sashimi/trans_proteomic_pipeline/src/Quantitation/Libra/docs/libra_info.html Sourceforge], including: | ||
| + | |||
| + | * Command line syntax for using Libra | ||
| + | * The condition file | ||
| + | * Details about what Libra does | ||
| + | * How accurate is the quantitation? | ||
| + | |||
| + | |||
| + | ==Authors== | ||
| + | *'''Patrick Pedrioli''': original code author of Quantitation | ||
| + | *'''Andrew Keller''': peptide assignment to proteins within pipeline | ||
| + | *'''Nichole King''': code maintenance/additions/corrections | ||
Revision as of 22:37, 9 April 2007
Contents |
Getting the software
This software is included in the current TPP distribution.
In a nutshell
Libra is a module within the trans-proteomic pipeline to perform quantification on MS/MS spectra that have multi-reagent labeled peptides. More specifically, at ISB we use Libra on MS/MS spectra of iTRAQ labeled samples.
More detail
More detailed information can be found at Sourceforge, including:
- Command line syntax for using Libra
- The condition file
- Details about what Libra does
- How accurate is the quantitation?
Authors
- Patrick Pedrioli: original code author of Quantitation
- Andrew Keller: peptide assignment to proteins within pipeline
- Nichole King: code maintenance/additions/corrections
