ISB Main

Seattle Proteome Center (SPC) - Proteomics Tools
NHLBI Proteomics Center at the Institute for Systems Biology


New at SPC

About the Center:
   Center Structure

Center Research
   Tech Modules
   Pilot Projects
   Macrophage WG
   Administrative Core

      Software Help
      Sample Data



Contact the Center

T2DExtractor - SCIEX/ABI 4700/4800 MALDI TOFTOF Data to mzXML

Java application to convert data from a SCIEX/ABI 4000 series MALDI TOFTOF instruments into mzXML format. This application is provided courtesy of Phil Andrews lab at the University of Michigan.

Download from (U. Michigan): ProteomeCommons Page

We want to thank our collaborators at FHCRC and LabKey for optimizing the performance of the converter and adding features such as spotID and LC-retention times to the output.

Download Sourcecode from LabKey: SVN Repository -- (log in with 'cpas' as both username and password)

For your convenience we've provided this application for download from our site.

Download from local site:


Proteomics Center @ ISB