TPP Amazon Machine Images
From SPCTools
| Revision as of 04:42, 5 April 2011 JoeS (Talk | contribs) (→Details) ← Previous diff |
Revision as of 18:08, 5 April 2011 JoeS (Talk | contribs) (→Manifest Naming And Location) Next diff → |
||
| Line 16: | Line 16: | ||
| == Developer's Guide == | == Developer's Guide == | ||
| - | ==== Manifest Naming And Location ==== | + | ==== Image Conventions ==== |
| - | The current schema for storing TPP images is in the S3 bucket named spctools, under the folder "AMI". Each new image should be placed in a folder named TPP-<version>-<date>, e.g. TPP-4.4.1_20110404. This way the very newest and latest release should be the first item when topologically sorted. | + | ===== Manifest Naming ===== |
| + | |||
| + | The current suggested schema for naming manifests is to use the default prefix/names assigned by the ec2 tools and place them in a "folder" with a name following the schema "TPP-<version>-<data>" where version is the version of TPP and date is a date indicator in the format YYYYMMDD. An optional serial number [.1,.2,...] can be included for the YYYYMMDD date if necessary. These "folders" should be placed in the correct S3 bucket by region (see next section). | ||
| + | |||
| + | For an example, the name ''spctools-images-us/TPP-4.4.1-20110403/manifest.xml'' references image with TPP 4.4.1 installed build on 4/3/2011. | ||
| + | |||
| + | ===== S3 Buckets ===== | ||
| + | |||
| + | The following buckets have been (or will be) created in each region for storing SPCTools TPP images. Each bucket should have a suffix indicating which region the bucket is in: | ||
| + | |||
| + | * spctools-images-us | ||
| + | * spctools-iamges-us-west-1 | ||
| + | * spctools-images-eu | ||
| == External Links == | == External Links == | ||
Revision as of 18:08, 5 April 2011
Starting with TPP 4.4.1 the TPP group is now making available pre-built Amazon Machine Images (AMI) with the latest TPP software installed to make it even easier to perform proteomics data analysis. These images are configured to be used with either the TPP Web Application (TWA), the TPP AWS high performance computing tools, or for your own in house applications. The images are based on the latest Ubuntu EC2 public images and include features such as persistent store in S3 or EBS backed filesystems and wine based conversions of MS/MS files.
Contents |
Details
This is an unix/linux instance-store backed 64-bit image based on the ubuntu 10.10 "mavrick" public image (ami-08f40561). It also contains the following open source software:
- OMSSA Version 2.1.9
- InsPecT Version 20101012
- Myrimatch Version 2.0.85
- Proteowizard's msconvert (Windows version)
Versions
User's Guide
Developer's Guide
Image Conventions
Manifest Naming
The current suggested schema for naming manifests is to use the default prefix/names assigned by the ec2 tools and place them in a "folder" with a name following the schema "TPP-<version>-<data>" where version is the version of TPP and date is a date indicator in the format YYYYMMDD. An optional serial number [.1,.2,...] can be included for the YYYYMMDD date if necessary. These "folders" should be placed in the correct S3 bucket by region (see next section).
For an example, the name spctools-images-us/TPP-4.4.1-20110403/manifest.xml references image with TPP 4.4.1 installed build on 4/3/2011.
S3 Buckets
The following buckets have been (or will be) created in each region for storing SPCTools TPP images. Each bucket should have a suffix indicating which region the bucket is in:
- spctools-images-us
- spctools-iamges-us-west-1
- spctools-images-eu
