From SPCTools

Trunk Check Ins As of 10/24/2011

Revision: 5567
Author: henryhlam
Date: 10:16:00 PM, Sunday, October 23, 2011
Message:
[SpectraST] High-mass accuracy MS2 support: frag type of CID-QTOF and HCD. Change to shuffleAllPeaks which is used by PTMProphet
----
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTConstants.hpp
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTCreateParams.cpp
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTPeakList.cpp
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTPeakList.hpp
Modified : /trunk/trans_proteomic_pipeline/src/Validation/PTMProphetParser/PTMProphet.cxx

Revision: 5565
Author: mhoopmann
Date: 3:15:24 PM, Friday, October 21, 2011
Message:
Fixed buffer overrun when reading small spectra compressed with zlib (compression increases spectrum size in these cases, hence the overrun). Moved stdint.h to linux build as it is not part of Visual Studio.
----
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/mzParser/mzParser.h
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzxmlhandler.cpp

Revision: 5561
Author: real_procopio
Date: 5:24:09 PM, Thursday, October 20, 2011
Message:
[Petunia] Added version checking upon login; warn users if using an old version of TPP
----
Modified : /trunk/trans_proteomic_pipeline/CGI/tpp_gui/tpp_gui.pl

Revision: 5560
Author: dshteyn
Date: 2:56:38 PM, Thursday, October 20, 2011
Message:
PTMProphetParser: NEW FEATURES amino acids and mass shifts are users settable as is mz tolerance, improved classification now outperforms ASCORE, EM is now default (new option NOEM).
----
Modified : /trunk/trans_proteomic_pipeline/src/Validation/PTMProphetParser/PTMProphet.cxx
Modified : /trunk/trans_proteomic_pipeline/src/Validation/PTMProphetParser/PTMProphet.h
Modified : /trunk/trans_proteomic_pipeline/src/Validation/PTMProphetParser/PTMProphetMain.cxx
Modified : /trunk/trans_proteomic_pipeline/src/Validation/PTMProphetParser/PTMProphetParser.cxx
Modified : /trunk/trans_proteomic_pipeline/src/Validation/PTMProphetParser/PTMProphetParser.h

Revision: 5558
Author: henryhlam
Date: 2:06:59 AM, Thursday, October 20, 2011
Message:
[SpectraST] New clustering algorithm. Saves memory, prevent deep recursion.
----
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTMzLibIndex.cpp
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTSpLibImporter.cpp
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTSpLibImporter.hpp

Revision: 5557
Author: henryhlam
Date: 2:01:34 AM, Thursday, October 20, 2011
Message:
[SpectraST] Allow import of non-peptide from MSP format
----
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTMspLibImporter.cpp

Revision: 5556
Author: henryhlam
Date: 1:59:58 AM, Thursday, October 20, 2011
Message:
[SpectraST] Consider all charges when library spectrum has charge 0
----
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTQuery.cpp

Revision: 5555
Author: henryhlam
Date: 1:52:25 AM, Thursday, October 20, 2011
Message:
[SpectraST] Allow users to specify their own m/z range for MRM transitions (Q3)
----
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTCreateParams.cpp
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTCreateParams.hpp
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTPeakList.cpp
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTPeakList.hpp
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTSpLibImporter.cpp

Revision: 5553
Author: real_procopio
Date: 5:02:11 PM, Wednesday, October 19, 2011
Message:
[dta2mzxml] Change 'plustwo' option to include lowest charge state found for a given scan; also make sure output is real mzXML
----
Modified : /trunk/trans_proteomic_pipeline/src/mzXML/converters/dta2mzxml/Dta2mzXML.cpp
Modified : /trunk/trans_proteomic_pipeline/src/mzXML/converters/dta2mzxml/Dta2mzXML.h
Modified : /trunk/trans_proteomic_pipeline/src/mzXML/converters/dta2mzxml/main.cpp

Revision: 5552
Author: eng_jk
Date: 12:59:35 PM, Tuesday, October 18, 2011
Message:
replicate branch 5551 checkin to trunk for xpress/mzML fix
----
Modified : /trunk/trans_proteomic_pipeline/src/Quantitation/XPress/XPressPeptideUpdateParser/XPressPeptideUpdateParserMain.cxx
Modified : /trunk/trans_proteomic_pipeline/src/common/util.cxx

Revision: 5548
Author: slagelwa
Date: 3:22:56 PM, Friday, October 14, 2011
Message:
* Set the default number of threads to 8 for tandem
* Include a warning in the comments that values for three 
  differential modifications are always needed
----
Modified : /trunk/trans_proteomic_pipeline/extern/hpctools/grid/templates/sequest.params
Modified : /trunk/trans_proteomic_pipeline/extern/hpctools/grid/templates/tandem.params

Revision: 5538
Author: henryhlam
Date: 12:43:02 AM, Monday, October 10, 2011
Message:
[Enzyme] Equate tryptic with trypsin
----
Modified : /trunk/trans_proteomic_pipeline/src/Enzyme/ProteolyticEnzyme/ProteolyticEnzyme.cxx

Revision: 5537
Author: henryhlam
Date: 12:35:35 AM, Monday, October 10, 2011
Message:
[PeptideProphet] More finely divided bins for error rate estimates. Important for modern, large datasets.
----
Modified : /trunk/trans_proteomic_pipeline/src/Validation/MixtureModel/MixtureModel.cxx

Revision: 5536
Author: henryhlam
Date: 12:32:35 AM, Monday, October 10, 2011
Message:
[InterProphet] More finely divided bins for error rate estimates. Important for modern, large datasets.
----
Modified : /trunk/trans_proteomic_pipeline/src/Validation/InterProphet/InterProphetParser/InterProphet.cxx

Revision: 5535
Author: henryhlam
Date: 12:19:18 AM, Monday, October 10, 2011
Message:
[InteractParser] Fix OMSSA's problem with n-term mods
----
Modified : /trunk/trans_proteomic_pipeline/src/Visualization/InteractParser/InteractParser.cxx

Revision: 5534
Author: henryhlam
Date: 12:12:16 AM, Monday, October 10, 2011
Message:
[xinteract] Move RefreshParser ahead of PeptideProphet to safeguard against some search engines' mangling the protein names and/or omitting NTT/NMC
----
Modified : /trunk/trans_proteomic_pipeline/src/Visualization/xinteract/xinteract.cxx

Revision: 5533
Author: henryhlam
Date: 12:02:43 AM, Monday, October 10, 2011
Message:
[Tandem2XML] Fix wrong enzyme specificity for Lys-C
----
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/Algorithm2XML/Tandem2XML/TandemParamsParser.cxx

Revision: 5532
Author: henryhlam
Date: 11:59:27 PM, Sunday, October 09, 2011
Message:
[util] Catch return values for smooth compiling
----
Modified : /trunk/trans_proteomic_pipeline/src/util/calculate_pi.cpp

Revision: 5531
Author: henryhlam
Date: 11:57:02 PM, Sunday, October 09, 2011
Message:
[MzXML2Search] Option to remove charge-reduced precursors for ETD spectra (useful for search engines that do not have that feature)
----
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/MzXML2Search/MzXML2Search.cxx

Revision: 5530
Author: henryhlam
Date: 10:03:18 PM, Sunday, October 09, 2011
Message:
[mzParser] Pound-include stdint.h and catch return values for smooth compiling
----
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/mzParser/mzParser.h
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzxmlhandler.cpp

Revision: 5529
Author: henryhlam
Date: 10:00:49 PM, Sunday, October 09, 2011
Message:
[util] Catch return values for smooth compiling
----
Modified : /trunk/trans_proteomic_pipeline/src/util/pep_dbcount.cpp
Modified : /trunk/trans_proteomic_pipeline/src/util/translateDNA2AA-FASTA.cpp

Revision: 5528
Author: eng_jk
Date: 2:18:53 PM, Thursday, October 06, 2011
Message:
change deflines to include which reading frame as part of accession
----
Modified : /trunk/trans_proteomic_pipeline/src/util/translateDNA2AA-FASTA.cpp

Revision: 5527
Author: eng_jk
Date: 2:16:52 PM, Thursday, October 06, 2011
Message:
additional cleanup of yesterday's xpress buffer overrun fix; mainly changing size of a few
allocated arrays which only affects mzML files with with non-sequential native IDs.
----
Modified : /trunk/trans_proteomic_pipeline/src/Quantitation/XPress/XPressPeptideParser/XPressPeptideParser.cxx
Modified : /trunk/trans_proteomic_pipeline/src/common/constants.h

Revision: 5524
Author: eng_jk
Date: 4:36:44 PM, Wednesday, October 05, 2011
Message:
quick mod to Patrick's buffer overrun fix (for non-sequential mzML scans)
----
Modified : /trunk/trans_proteomic_pipeline/src/Quantitation/XPress/XPressPeptideParser/XPressPeptideParser.cxx

Revision: 5523
Author: ppatrick
Date: 2:09:52 PM, Wednesday, October 05, 2011
Message:
Added Supplemental Activation
Removed 0 intensity peaks
----
Modified : /trunk/trans_proteomic_pipeline/src/mzXML/converters/ReAdW/FilterLine.cpp
Modified : /trunk/trans_proteomic_pipeline/src/mzXML/converters/ReAdW/FilterLine.h
Modified : /trunk/trans_proteomic_pipeline/src/mzXML/converters/ReAdW/ThermoInterface.cpp

Revision: 5522
Author: ppatrick
Date: 5:40:47 AM, Wednesday, October 05, 2011
Message:
Fixed buffer overrun in void XPressPeptideParser::validate_mzXMLfile() 
----
Modified : /trunk/trans_proteomic_pipeline/src/Quantitation/XPress/XPressPeptideParser/XPressPeptideParser.cxx

Revision: 5521
Author: ppatrick
Date: 5:38:48 AM, Wednesday, October 05, 2011
Message:
Fixed buffer overruns in void XPressPeptideParser::parse(const char *xmlfile) and void XPressPeptideParser::validate_mzXMLfile()
----
Modified : /trunk/trans_proteomic_pipeline/src/Quantitation/XPress/XPressPeptideParser/XPressPeptideParser.cxx

Revision: 5520
Author: ppatrick
Date: 5:35:18 AM, Wednesday, October 05, 2011
Message:
Initialized preExt to account for incorrect file names being passed.
----
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/mzParser/RAMPface.cpp

Revision: 5519
Author: dshteyn
Date: 1:31:11 PM, Tuesday, October 04, 2011
Message:
RefreshParser: make RefreshParser mapping of semi and non trypic peptides consistent with the search engine parameters unless overridden on the commandline (per Jimmy's and Vagisha's posts to spctools-dev of Jun 10 2011)
----
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/RefreshParser/RefreshParser.cxx
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/RefreshParser/RefreshParserMain.cxx

Revision: 5518
Author: ppatrick
Date: 12:29:44 PM, Tuesday, October 04, 2011
Message:
increased min peptide probability to 0.8 from 0.5
----
Modified : /trunk/trans_proteomic_pipeline/src/Quantitation/XPress/XPressProteinRatioParser/XPressProteinRatioParser.cxx

Revision: 5517
Author: ppatrick
Date: 12:28:23 PM, Tuesday, October 04, 2011
Message:
Changed logic of xsl to speed up loading.
----
Modified : /trunk/trans_proteomic_pipeline/src/Quantitation/XPress/XPressCGIProteinDisplayParser/XPressCGIProteinDisplay.cxx

Revision: 5516
Author: ppatrick
Date: 8:57:14 AM, Tuesday, October 04, 2011
Message:
Changed from theoretical precursor mass to measured one to allow for narrower tolerances.
----
Modified : /trunk/trans_proteomic_pipeline/src/Quantitation/XPress/XPressPeptideParser/XPressPeptideParser.cxx

Revision: 5515
Author: slagelwa
Date: 11:58:33 AM, Thursday, September 29, 2011
Message:
* now removes the log files before submission
* uses new conversion queues
* no longer allows submissions with the --server flag and instead
  uses queues

----
Modified : /trunk/trans_proteomic_pipeline/extern/hpctools/grid/bin/qconvert

Revision: 5514
Author: dshteyn
Date: 5:04:33 PM, Friday, September 23, 2011
Message:
Fix typo
----
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp

Revision: 5511
Author: dshteyn
Date: 4:20:07 PM, Friday, September 23, 2011
Message:
Adding back support for Agilent QTOF mzML
----
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp

Revision: 5510
Author: slagelwa
Date: 3:28:18 PM, Friday, September 23, 2011
Message:
Re-merged 4.5 changes in trunk.  SVNTortise didn't list to my "accept branch" changes when I did the merge.

(ALSO MEANS that the trunk changes in these two files will likely be lost)

----
Modified : /trunk/trans_proteomic_pipeline/CGI/tpp_gui/tpp_gui.pl
Modified : /trunk/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp

Revision: 5509
Author: dshteyn
Date: 3:04:39 PM, Friday, September 23, 2011
Message:
PTMProphet: adding getVal functions for KDModel.
----
Modified : /trunk/trans_proteomic_pipeline/src/Validation/InterProphet/InterProphetParser/KDModel.cxx
Modified : /trunk/trans_proteomic_pipeline/src/Validation/InterProphet/InterProphetParser/KDModel.h

Revision: 5508
Author: dshteyn
Date: 2:36:13 PM, Friday, September 23, 2011
Message:
SpectraSTLIB: adding randomization of spectrum function for PTMProphet.
----
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTLibImporter.cpp
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTPeakList.cpp
Modified : /trunk/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTPeakList.hpp

Branch Check Ins As of 10/24/2011

Revision: 5566
Author: real_procopio
Date: 4:10:41 PM, Friday, October 21, 2011
Message:
[Petunia] Decoy models pages should only ask for pep/protXML files as input; minor code clean-up and re-formatting
----
Modified : /branches/4-5/trans_proteomic_pipeline/CGI/tpp_gui/tpp_gui.pl

Revision: 5564
Author: mhoopmann
Date: 3:10:06 PM, Friday, October 21, 2011
Message:
Fixed buffer overrun when reading small spectra compressed with zlib (compression increases spectrum size in these cases, hence the overrun). Moved stdint.h to linux build as it is not part of Visual Studio.
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Parsers/mzParser/mzParser.h
Modified : /branches/4-5/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp
Modified : /branches/4-5/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzxmlhandler.cpp

Revision: 5563
Author: real_procopio
Date: 1:40:59 PM, Friday, October 21, 2011
Message:
[Petunia] Added support for Bruker .yep and .baf files, as well as mzXML output to msconvert; Expanded Libra normalization channel option to 8
----
Modified : /branches/4-5/trans_proteomic_pipeline/CGI/tpp_gui/tpp_gui.pl

Revision: 5562
Author: real_procopio
Date: 5:27:40 PM, Thursday, October 20, 2011
Message:
[Petunia] merging rev 5561 from trunk
----
Modified : /branches/4-5/trans_proteomic_pipeline/CGI/tpp_gui/tpp_gui.pl

Revision: 5559
Author: real_procopio
Date: 12:20:06 PM, Thursday, October 20, 2011
Message:
merging trunk changes from rev 5553
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/mzXML/converters/dta2mzxml/Dta2mzXML.cpp
Modified : /branches/4-5/trans_proteomic_pipeline/src/mzXML/converters/dta2mzxml/Dta2mzXML.h
Modified : /branches/4-5/trans_proteomic_pipeline/src/mzXML/converters/dta2mzxml/main.cpp

Revision: 5554
Author: henryhlam
Date: 1:36:19 AM, Thursday, October 20, 2011
Message:
[SpectraST] Allow users to specify their own m/z range for MRM transitions (Q3)
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTCreateParams.cpp
Modified : /branches/4-5/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTCreateParams.hpp
Modified : /branches/4-5/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTPeakList.cpp
Modified : /branches/4-5/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTPeakList.hpp
Modified : /branches/4-5/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTSpLibImporter.cpp

Revision: 5551
Author: eng_jk
Date: 12:14:31 PM, Tuesday, October 18, 2011
Message:
Fix for mzML files when viewing xpress chromatograms through the ProteinProphet to XPressCGIProteinDisplayParser.cgi binary.
No notion of file extensions exist in that path and mzXML files were always assumed.  This fix simply has the cgi try mzML
file extension if the mzXML file is not found.
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Quantitation/XPress/XPressPeptideUpdateParser/XPressPeptideUpdateParserMain.cxx
Modified : /branches/4-5/trans_proteomic_pipeline/src/common/util.cxx

Revision: 5550
Author: slagelwa
Date: 2:41:42 PM, Monday, October 17, 2011
Message:
Cut&paste in cygwin inserted newline
----
Modified : /branches/4-5/trans_proteomic_pipeline/extern/xtandem/src_merged/msequenceserver.cpp

Revision: 5549
Author: slagelwa
Date: 2:31:27 PM, Monday, October 17, 2011
Message:
Increased size of buffer for holding fasta header lines as per recommendation by David Trudgian.
----
Modified : /branches/4-5/trans_proteomic_pipeline/extern/xtandem/src/msequenceserver.cpp
Modified : /branches/4-5/trans_proteomic_pipeline/extern/xtandem/src_cyclone/msequenceserver.cpp
Modified : /branches/4-5/trans_proteomic_pipeline/extern/xtandem/src_merged/msequenceserver.cpp

Revision: 5547
Author: henryhlam
Date: 10:48:06 PM, Monday, October 10, 2011
Message:
[PeptideProphet] More finely divided bins for error rate estimates. Important for modern, large datasets. (trunk r5537)
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Validation/MixtureModel/MixtureModel.cxx

Revision: 5546
Author: henryhlam
Date: 8:30:09 PM, Monday, October 10, 2011
Message:
[InterProphet] More finely divided bins for error rate estimates. Important for modern, large datasets. (trunk r5536)
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Validation/InterProphet/InterProphetParser/InterProphet.cxx

Revision: 5545
Author: henryhlam
Date: 8:27:17 PM, Monday, October 10, 2011
Message:
[Enzyme] Equate tryptic with trypsin (trunk r5538)
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Enzyme/ProteolyticEnzyme/ProteolyticEnzyme.cxx

Revision: 5544
Author: henryhlam
Date: 8:25:26 PM, Monday, October 10, 2011
Message:
[InteractParser] Fix OMSSA's problem with n-term mods (trunk r5535)
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Visualization/InteractParser/InteractParser.cxx

Revision: 5543
Author: henryhlam
Date: 8:23:42 PM, Monday, October 10, 2011
Message:
Move RefreshParser ahead of PeptideProphet to safeguard against some search engines' mangling the protein names and/or omitting NTT/NMC (trunk r5534)
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Visualization/xinteract/xinteract.cxx

Revision: 5542
Author: henryhlam
Date: 8:18:11 PM, Monday, October 10, 2011
Message:
[Tandem2XML] Fix wrong enzyme specificity for Lys-C (trunk r5533)
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Parsers/Algorithm2XML/Tandem2XML/TandemParamsParser.cxx

Revision: 5541
Author: henryhlam
Date: 8:15:16 PM, Monday, October 10, 2011
Message:
[util] Catch return values for smooth compiling (trunk r5532)
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/util/calculate_pi.cpp
Modified : /branches/4-5/trans_proteomic_pipeline/src/util/pep_dbcount.cpp
Modified : /branches/4-5/trans_proteomic_pipeline/src/util/translateDNA2AA-FASTA.cpp

Revision: 5540
Author: henryhlam
Date: 8:12:27 PM, Monday, October 10, 2011
Message:
[mzParser] Pound-include stdint.h and catch return values for smooth compiling (trunk r5530)
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Parsers/mzParser/mzParser.h
Modified : /branches/4-5/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp
Modified : /branches/4-5/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzxmlhandler.cpp

Revision: 5539
Author: henryhlam
Date: 8:08:54 PM, Monday, October 10, 2011
Message:
[SpectraST] Fix rare error when S/N calculation failed due to too few peaks outside precursor region (trunk r5501)
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Search/SpectraST/SpectraSTPeakList.cpp

Revision: 5526
Author: eng_jk
Date: 2:14:46 PM, Thursday, October 06, 2011
Message:
additional cleanup of yesterday's xpress buffer overrun fix; mainly changing size of a few
allocated arrays which only affects mzML files with with non-sequential native IDs.
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Quantitation/XPress/XPressPeptideParser/XPressPeptideParser.cxx
Modified : /branches/4-5/trans_proteomic_pipeline/src/common/constants.h

Revision: 5525
Author: eng_jk
Date: 4:42:41 PM, Wednesday, October 05, 2011
Message:
quick mod to Patrick's buffer overrun fix (for non-sequential mzML scans); adding to 4.5 branch
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Quantitation/XPress/XPressPeptideParser/XPressPeptideParser.cxx

Revision: 5513
Author: dshteyn
Date: 5:04:04 PM, Friday, September 23, 2011
Message:
Fix typo
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp

Revision: 5512
Author: dshteyn
Date: 4:24:14 PM, Friday, September 23, 2011
Message:
support for Agilent QTOF mzML
----
Modified : /branches/4-5/trans_proteomic_pipeline/src/Parsers/mzParser/saxmzmlhandler.cpp