Software:PeptideSieve:Build

From SPCTools

Revision as of 18:39, 1 November 2007 Dcampbel (Talk | contribs) ← Previous diff		Current revision Parag (Talk | contribs)
Line 1:		Line 1:
		+	PeptideSieve can be built using the boost build system and bjam.
		+
	===bjam build instructions===		===bjam build instructions===
-	1. Obtain and install boost libraries for your platform. (Most linux systems should have boost already installed somewhere.)	+	1. Obtain and install boost libraries for your platform. (Most linux systems should have boost already installed somewhere.) If not, you can get them from [http://www.boost.org/ here]
-	2. Set boost_build directory environment variable and add and bjam to your path	+	2. Set a few environment variables and add bjam to your path
-	3. Go into the peptideSieve directory and edit the Jamfile to
-	uncomment and edit the line below to point at the boost include dir:	+	BOOST_BUILD_PATH=/hpc/share/boost/tools/build/v2/
-	<nowiki>#</nowiki> : <include>/stf/home/atrium/darren/local/include	+	PATH=$PATH:/hpc/bin/bjam
-		+
-		+
-	''or'' set the following environment variables:	+
-		+
-	BOOST_BUILD_PATH=/stf/home/atrium/darren/local/share/boost-build	+
	CPLUS_INCLUDE_PATH=/stf/home/atrium/darren/local/include		CPLUS_INCLUDE_PATH=/stf/home/atrium/darren/local/include
-	LIBRARY_PATH=/stf/home/atrium/darren/local/lib	+	LIBRARY_PATH=/tools/lib:/hpc/lib
-		+
-		+
-	4) Type 'bjam' and it just works.	+
-		+
-		+
-	[http://tools.proteomecenter.org/wiki/index.php?title=Software:PeptideSieve:Build Back] to main PeptideSieve page.	+
-		+
-		+
-		+
-		+
-		+
-		+
-		+
-		+
-		+
-		+
-	===Old build instructions===	+	LD_LIBRARY_PATH=/tools/lib:/hpc/lib
-	1. Obtain and install boost libraries for your platform. (Most linux systems should have boost already installed somewhere.)
-	2. Edit the peptideSieveDistribution/src/make/defaults.inc file to indicate library location.	+	3) Type 'bjam' and it should compile a binary into peptideSieve/bin.
-	3. Change directories to peptideSieveDistribution/src/peptideSieve and run make	+	[http://tools.proteomecenter.org/wiki/index.php?title=Software:PeptideSieve Back] to main PeptideSieve page.

---

Current revision

PeptideSieve can be built using the boost build system and bjam.

bjam build instructions

1. Obtain and install boost libraries for your platform. (Most linux systems should have boost already installed somewhere.) If not, you can get them from here

2. Set a few environment variables and add bjam to your path

BOOST_BUILD_PATH=/hpc/share/boost/tools/build/v2/

PATH=$PATH:/hpc/bin/bjam

CPLUS_INCLUDE_PATH=/stf/home/atrium/darren/local/include

LIBRARY_PATH=/tools/lib:/hpc/lib

LD_LIBRARY_PATH=/tools/lib:/hpc/lib

3) Type 'bjam' and it should compile a binary into peptideSieve/bin.

Back to main PeptideSieve page.