TPP:4.2.0 Release Notes

From SPCTools

TPP 4.2.0 Release Notes

To developers: Please add anything you want to be sent out here. I'll take out the author attribution in the actual announcement. We can keep this page (or something similar) on the Wiki, as well.

(From Natalie)

• To list-- various pepXMLViewer improvements/fixes

(From Brian)

ASAPRatioPeptideParser speed improvement from 10x for small compute-bound files to 300+x for larger disk bound files.

Gzipped (.gz) pepXML, protXML and mzXML or mzML files are now treated as native formats, for reduced disk usage and easier sharing across networks:

The various mz(X)ML converters now accept a -g (and --gzip, in many cases) argument to produce .mz(X)ML.gz directly

tpp_gui.pl allows users to select gzip output from converters

tpp_gui_config.pl allows for making gzipped mzXML/mzML/pepXML/protXML the default

You can simply add .gz to your output filename and the pipeline will know to gzip the pepXML and protXML files it produces.