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| - | The '''Seattle Proteome Center (SPC)''' is committed to providing free, open-source, software projects in support of cutting-edge proteomics research. The SPC maintains active support and education for the open-source proteomics community. | + | Attention: |
| - | ==Education, outreach, training and support== | + | Level Up Instantly in Forge of Empires—Unlock Unlimited Gold, Diamonds, and Supplies! |
| - | *SPC/TPP course: | + | Interest: |
| - | ** No courses scheduled at the moment. Please check back soon! | + | |
| - | ** [https://moritz.isbscience.org/courses/proteomics-informatics-course/ Information and materials from previous courses] | + | |
| - | *Outreach at conferences: | + | Tired of grinding for hours just to get the resources you need in Forge of Empires? Our cutting-edge Cheats, Hacks, and Generators for iPhone and Android put the power back in your hands. Enjoy unlimited gold, diamonds, and supplies at your fingertips—no more waiting, no more wasting time! |
| - | ** None scheduled at the moment | + | |
| - | *Active support: all users, both new and experienced, are encouraged to participate in our active [http://groups.google.com/group/spctools-discuss spctools-discuss discussion group]. Discussions range from installation support to advanced data processing questions and feature requests. | + | Desire: |
| - | ** Please also see [http://groups.google.com/group/spctools-announce spctools-announce group] for important notifications of updates to our software. | + | |
| + | Imagine dominating every era with ease, outpacing your rivals, and building the empire you’ve always dreamed of. Thousands of players have already upgraded their experience using our safe and secure tools. Don’t let slow progress hold you back when victory is just a click away! | ||
| - | ==[[Formats:Overview|SPC open proteomics data formats]]: mzXML, pepXML, protXML== | + | Action: |
| - | Learn more about the SPC-developed open formats, which include [[Formats:mzXML|mzXML]], [[Formats:pepXML|pepXML]], and [[Formats:protXML|protXML]] on the [[Formats:Overview|Formats]] page. | + | |
| + | Ready to take control? Access our Forge of Empires Cheats now—resources are just seconds away! Act fast; exclusive access is limited! | ||
| - | ==[[Software:TPP|Trans-Proteomic Pipeline (TPP)]]: MS2 proteomics validation and analysis== | + | <big><big>🟢 Link to the tool online: '''[https://www.cheatsfinder.org/88415d4 https://www.cheatsfinder.org/88415d4] 👈 '''</big></big> |
| - | The Trans-Proteomic Pipeline (TPP) is a completely free software | + | |
| - | solution for MS/MS-based shotgun proteomics analysis with a well-established | + | |
| - | worldwide user community. TPP is | + | |
| - | available on Linux and Windows systems and builds on Mac OS X as well. TPP spans | + | |
| - | * conversion of raw data to open formats; | + | |
| - | * support for searching spectra and peptide identification with various popular search engines, including the bundled X!Tandem search software (from The GPM) and [http://comet-ms.sourceforge.net/ Comet], as well as spectral library searching with [[SpectraST]], and cross-linking data with [http://www.kojak-ms.org/ Kojak]; | + | |
| - | * conversion of search engine results to a unified format; | + | |
| - | * statistical validation of peptide and protein identifications; | + | |
| - | * quantitative proteomics analysis tools; | + | |
| - | * and tools for interaction with and visualizing results. | + | |
| - | * '''The latest TPP version is ''7.3.0,'' released ''April 2025''.''' | + | |
| - | ** Download directly at: [https://sourceforge.net/projects/sashimi/files/Trans-Proteomic%20Pipeline%20%28TPP%29/TPP%20v7.3%20%28Trade%20Wind%29%20rev%200/ Sourceforge] | + | |
| - | ** Release Notes: [[TPP:7.3.0_Release_Notes]] | + | |
| - | *Additional [[Software:TPP | TPP documentation]] | + | |
| - | + | ||
| - | + | ||
| - | ==[[Software:PeptideAtlas|PeptideAtlas]]== | + | |
| - | PeptideAtlas is a multi-organism, publicly accessible compendium of peptides | + | |
| - | identified in a large set of tandem mass spectrometry proteomics | + | |
| - | experiments. Mass spectrometer output files are collected for human, mouse, | + | |
| - | yeast, and several other organisms, and searched using the latest search | + | |
| - | engines and protein sequences. All results of sequence and spectral library | + | |
| - | searching are subsequently processed through the Trans Proteomic Pipeline to | + | |
| - | derive a probability of correct identification for all results in a uniform | + | |
| - | manner to insure a high quality database, along with false discovery rates | + | |
| - | at the whole atlas level. Results may be queried and browsed at the | + | |
| - | PeptideAtlas web site. The raw data, search results, and full builds can | + | |
| - | also be downloaded for other uses. | + | |
Current revision
Attention:
Level Up Instantly in Forge of Empires—Unlock Unlimited Gold, Diamonds, and Supplies!
Interest:
Tired of grinding for hours just to get the resources you need in Forge of Empires? Our cutting-edge Cheats, Hacks, and Generators for iPhone and Android put the power back in your hands. Enjoy unlimited gold, diamonds, and supplies at your fingertips—no more waiting, no more wasting time!
Desire:
Imagine dominating every era with ease, outpacing your rivals, and building the empire you’ve always dreamed of. Thousands of players have already upgraded their experience using our safe and secure tools. Don’t let slow progress hold you back when victory is just a click away!
Action:
Ready to take control? Access our Forge of Empires Cheats now—resources are just seconds away! Act fast; exclusive access is limited!
🟢 Link to the tool online: https://www.cheatsfinder.org/88415d4 👈
