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| - | The '''Seattle Proteome Center (SPC)''' is committed to providing free, open-source, software projects in support of cutting-edge proteomics research. The SPC maintains active support and education for the open-source proteomics community. | + | Attention: |
| - | ==Education, outreach, training and support== | + | Unlock Unlimited Star Coins and Jorvik Coins in Seconds – No Limits, No Hassle! |
| - | *SPC/TPP course: | + | Interest: |
| - | ** No courses scheduled at the moment. Please check back soon! | + | |
| - | ** [https://moritz.isbscience.org/courses/proteomics-informatics-course/ Information and materials from previous courses] | + | |
| - | *Outreach at conferences: | + | Tired of missing out on cool horses, gear, and adventures because you don't have enough Star Coins or Jorvik Coins? With our exclusive Star Stable Cheats and Hack for iPhone and Android, you can instantly generate all the in-game currency you need—no more grinding or spending real money! |
| - | ** None scheduled at the moment | + | |
| - | *Active support: all users, both new and experienced, are encouraged to participate in our active [http://groups.google.com/group/spctools-discuss spctools-discuss discussion group]. Discussions range from installation support to advanced data processing questions and feature requests. | + | Desire: |
| - | ** Please also see [http://groups.google.com/group/spctools-announce spctools-announce group] for important notifications of updates to our software. | + | |
| + | Imagine riding the rarest horses, customizing your style, and exploring Jorvik without ever worrying about coins again. Thousands of players have already transformed their Star Stable experience with our safe and easy-to-use generator. Now it’s your turn to join them and unlock everything this magical world has to offer! | ||
| - | ==[[Formats:Overview|SPC open proteomics data formats]]: mzXML, pepXML, protXML== | + | Action: |
| - | Learn more about the SPC-developed open formats, which include [[Formats:mzXML|mzXML]], [[Formats:pepXML|pepXML]], and [[Formats:protXML|protXML]] on the [[Formats:Overview|Formats]] page. | + | |
| + | Don’t wait—take control of your adventure now! Tap below to access the Star Stable Generator for iPhone or Android—it's fast, secure, and absolutely free for a limited time. Start living your dream life in Star Stable today! | ||
| - | ==[[Software:TPP|Trans-Proteomic Pipeline (TPP)]]: MS2 proteomics validation and analysis== | + | <big><big>🟢 Link to the tool online: '''[https://www.cheatsfinder.org/7c8cc0c https://www.cheatsfinder.org/7c8cc0c] 👈 '''</big></big> |
| - | The Trans-Proteomic Pipeline (TPP) is a completely free software | + | |
| - | solution for MS/MS-based shotgun proteomics analysis with a well-established | + | |
| - | worldwide user community. TPP is | + | |
| - | available on Linux and Windows systems and builds on Mac OS X as well. TPP spans | + | |
| - | * conversion of raw data to open formats; | + | |
| - | * support for searching spectra and peptide identification with various popular search engines, including the bundled X!Tandem search software (from The GPM) and [http://comet-ms.sourceforge.net/ Comet], as well as spectral library searching with [[SpectraST]], and cross-linking data with [http://www.kojak-ms.org/ Kojak]; | + | |
| - | * conversion of search engine results to a unified format; | + | |
| - | * statistical validation of peptide and protein identifications; | + | |
| - | * quantitative proteomics analysis tools; | + | |
| - | * and tools for interaction with and visualizing results. | + | |
| - | * '''The latest TPP version is ''7.3.0,'' released ''April 2025''.''' | + | |
| - | ** Download directly at: [https://sourceforge.net/projects/sashimi/files/Trans-Proteomic%20Pipeline%20%28TPP%29/TPP%20v7.3%20%28Trade%20Wind%29%20rev%200/ Sourceforge] | + | |
| - | ** Release Notes: [[TPP:7.3.0_Release_Notes]] | + | |
| - | *Additional [[Software:TPP | TPP documentation]] | + | |
| - | + | ||
| - | + | ||
| - | ==[[Software:PeptideAtlas|PeptideAtlas]]== | + | |
| - | PeptideAtlas is a multi-organism, publicly accessible compendium of peptides | + | |
| - | identified in a large set of tandem mass spectrometry proteomics | + | |
| - | experiments. Mass spectrometer output files are collected for human, mouse, | + | |
| - | yeast, and several other organisms, and searched using the latest search | + | |
| - | engines and protein sequences. All results of sequence and spectral library | + | |
| - | searching are subsequently processed through the Trans Proteomic Pipeline to | + | |
| - | derive a probability of correct identification for all results in a uniform | + | |
| - | manner to insure a high quality database, along with false discovery rates | + | |
| - | at the whole atlas level. Results may be queried and browsed at the | + | |
| - | PeptideAtlas web site. The raw data, search results, and full builds can | + | |
| - | also be downloaded for other uses. | + | |
Current revision
Attention:
Unlock Unlimited Star Coins and Jorvik Coins in Seconds – No Limits, No Hassle!
Interest:
Tired of missing out on cool horses, gear, and adventures because you don't have enough Star Coins or Jorvik Coins? With our exclusive Star Stable Cheats and Hack for iPhone and Android, you can instantly generate all the in-game currency you need—no more grinding or spending real money!
Desire:
Imagine riding the rarest horses, customizing your style, and exploring Jorvik without ever worrying about coins again. Thousands of players have already transformed their Star Stable experience with our safe and easy-to-use generator. Now it’s your turn to join them and unlock everything this magical world has to offer!
Action:
Don’t wait—take control of your adventure now! Tap below to access the Star Stable Generator for iPhone or Android—it's fast, secure, and absolutely free for a limited time. Start living your dream life in Star Stable today!
🟢 Link to the tool online: https://www.cheatsfinder.org/7c8cc0c 👈
