TPP:V5Tasks

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Revision as of 19:29, 11 February 2015

List of tasks related to releasing TPP version 5.0

Category	Priority	Status	Task	Notes
General	high	80%	Deal with base href issue	URL issues in TPP. Coincides with FILE and URL locations. Document build usage (BASE_URL) Test paths in file generation
README	high	0%	Document layouts, structure, platform specifics	See examples: http://wiki.apache.org/httpd/DistrosDefaultLayout https://help.ubuntu.com/lts/serverguide/httpd.html http://www.control-escape.com/web/configuring-apache2-debian.html document Windows setup w/mingw64 mention structure of how makefiles are laid out mention top level targets, help mention deletion of visual studio files
Installer	high	50%	Manage Windows PATH variable	Add TPP paths to PATH on install, remove on uninstall
General	high	100%	Merge TPP4.8 into TPP5
General	high	0%	Merge everything into trunk
Installer	high	0%	Add back in win32 (UnxUtils) utilities	Are any other the other win bundles even needed anymore: WIN_LIB_DIRS = PerlSupport UnxUtils apache-w32-2.2.25 bsdtar-1.2.38-bin gdwin32 gnuplot libw32c setacl-cmdline xsltproc zlib125-dll
General	high	100%	DEFAULT_TPP_INSTALL_ROOT ???	Fix/replace references to this define
Installer	high	0%	Bug, Windows PATH cleared on uninstalled
Build	high	0%	Document win build requirements	MinGW, MinGW-64, Inno, etc and how to get it setup
General	high	0%	Basic set of tests	Add a simple set of tests to the make process ("make test")
General	high	0%	Luis builds Windows TPP with recipe	Create a windows build recipe and have Luis do it
General	high	50%	Create a AWS AMI creation recipe	Under the generic AWS account, Luis can build an AMI with recipe
Installer	high	20%	Manage m PERL5LIB on install/uninstall
General	high	0%	Fix Alias /ISB "/proteomics/sw/tpp-dev"
General	medium	25%	Reconcile Window's differences	Compare a listing of directories/files in TPP 4.8 to TPP 5.0 and address all of the differences.
Strawberry Perl	medium	0 %	Provide a Perl "env" file	Strawberry "portable" perl comes with a bat file that sets up the Windows cmd shell to use perl in its installed location. We should copy it and modify it so that it works for TPP. provide wiki(?) documentation on its usage
General	medium	0%	Merge amztpp into source tree
Installer	medium	0%	Missing ProteoWizard licensing warning	Recommend putting a notice in the license txt file that tells uses to read the licenses in the licenses folder.
Build	medium	80%	Relocatable tpp: Common/constants.h	Look at the constants. DEFAULT_LOCAL_BIN, DEFAULT_COMETLINKSDIR. Need a better scheme that supports relocatable tpp
Installer	medium	0%	Check for previously installed TPP	Installer should check for TPP 4.8 installations and not install til they are removed: Check for ActivePerl and tell them that they can remove it Check for ISB/data folder, tell them they can move it
Build	medium	0 %	Review Makefiles/Update documentation	std variables in toplevel makefile CXX, LD, LDFLAGS, CXXFLAGS, others? use of order only to create staging/build area use of depns file, compiles each source file, generating the dependencies if necessary using gcc instead of the old fashioned way suggested in the GNU Makefile manual See http://stackoverflow.com/questions/8025766/makefile-auto-dependency-generation and the GNU gcc manual for more information. Document overloading main targets"
General	medium	0%	Nightly builds
Spectrast	medium	0%	Deal with Spectrast's unique makefile
Strawberry Perl	low	0%	Issue with ~/.cpan directory	The users ~/.cpan home directory can mess with building cpan modules. Can we trick the program cpan to ignore it to make builds less error prone?
Installer	low	0%	Inno's AppID	Inno installers/programs use a registry key identifier. We didn't have one in the past but simply used a string in the registry. Should we use the app id or just the string?
Installer	low	75%	Relocatable data TPP	Currently asks for the data directory but does nothing with it. Requires a relocatable TPP in the code (paths/urls)
General	low	0%	Remove tpp_crypt.pl	Doesn't seem to be used anywhere
General	low	0%	Remove runperl, run_in	Doesn't seem to be used anywhere
Build	low	0%	BUILD.mk file	Do we really need this? svnversion takes long time so I created a BUILD.mk file with the info in it. But perhaps this only really is needed for a "make release" target?
Build	low	0%	src/libraries.mk	Consider doing away with the complexity of the libraries.mk file in src?
General	low	0%	Clean up installer_linux	Include Ubutuna, Debian, AWS scripts here
General	low	0%	Ensure all licenses are in licenses/
General	low	0%	Remove the funny Enzyme file	Andy confirmed in an email
General	low	0%	pepxml xsl namespace	Deal with PEPXML_NAMESPACE ???? #define PEPXML_NAMESPACE ""http://regis-web.systemsbiology.net/pepXML"" #define DEFAULT_PEPXML_STD_XSL ""http://localhost/"" #define DEFAULT_PEPXML_STD_XSL_WEB_PATH ""http://localhost/"""
Build	low	0%	Fix TODO in src/Visualization/Makefile
General	low	0%	Find a MacOS tester