TPP 4.3.1: Installing on Ubuntu 10.04

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Revision as of 17:55, 20 May 2010 Jesse j (Talk | contribs) (→Installation Procedure) ← Previous diff		Revision as of 18:08, 20 May 2010 Jesse j (Talk | contribs) (→Installation Procedure) Next diff →
Line 12:		Line 12:
	sh ./install-prerequisites-ubuntu-9_04.sh		sh ./install-prerequisites-ubuntu-9_04.sh
-	cd ../trans_proteomic_pipeline/src/	+	cd ../src/
	make		make
	make install		make install

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Revision as of 18:08, 20 May 2010

Installation Procedure

• If you don't have subversion, do: sudo aptitude install subversion

Note: This is not the only way to install TPP, and these instructions have not yet been tested by other users.

#If admin permission is needed, enter the command: sudo bash
cd /usr/local/src/
svn co https://sashimi.svn.sourceforge.net/svnroot/sashimi/tags/release_4-3-1/trans_proteomic_pipeline/
cd trans_proteomic_pipeline/installer_linux/
sh ./install-prerequisites-ubuntu-9_04.sh

cd ../src/
make
make install

Debugging

• If Make reports an error in saxhandler.h, add "#include <stdint.h>" (Without the quotation marks) to the top of the saxhandler.h file.