TPP 4.3.1: Installing on Ubuntu 10.04

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Revision as of 21:27, 14 May 2010 Jesse j (Talk | contribs) (→Installation Procedure) ← Previous diff		Revision as of 21:29, 14 May 2010 Jesse j (Talk | contribs) (→Installation Procedure) Next diff →
Line 3:		Line 3:
	<pre>		<pre>
		+	#If admin permission is needed, enter the command: sudo bash
	cd /usr/local/src/		cd /usr/local/src/
	svn co https://sashimi.svn.sourceforge.net/svnroot/sashimi/tags/release_4-3-1/trans_proteomic_pipeline/		svn co https://sashimi.svn.sourceforge.net/svnroot/sashimi/tags/release_4-3-1/trans_proteomic_pipeline/
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	cd ../trans_proteomic_pipeline/src/		cd ../trans_proteomic_pipeline/src/
-
-	#The following commands may need to be prefaced with the sudo command
	make		make
	make install		make install

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Revision as of 21:29, 14 May 2010

Installation Procedure

#If admin permission is needed, enter the command: sudo bash
cd /usr/local/src/
svn co https://sashimi.svn.sourceforge.net/svnroot/sashimi/tags/release_4-3-1/trans_proteomic_pipeline/
cd installer_linux/
sh ./install-prerequisites-ubuntu-9_04.sh

cd ../trans_proteomic_pipeline/src/
make
make install

Debugging

• If Make reports an error in saxhandler.h, add "#include <stdint.h>" (Without the quotation marks) to the top of the saxhandler.h file.