Msconvert Capabilities
From SPCTools
(Difference between revisions)
Revision as of 01:17, 4 March 2010 Gsun (Talk | contribs) ← Previous diff |
Revision as of 18:29, 17 March 2010 Tfarrah (Talk | contribs) Next diff → |
||
Line 3: | Line 3: | ||
Msconvert can convert successfully to mzML. However, it does not work for mzXML fully. | Msconvert can convert successfully to mzML. However, it does not work for mzXML fully. | ||
Trapper can convert to mzXML only. | Trapper can convert to mzXML only. | ||
+ | |||
+ | <hr> | ||
+ | <h1>Agilent</h1> | ||
+ | Raw file type: .d directory | ||
+ | <br> | ||
+ | raw-to-mzXML converter: trapper | ||
+ | <h2>trapper</h2> | ||
+ | <h3>mzXML</h3> | ||
+ | Conversion: OK | ||
+ | <br>X!Tandem search: | ||
+ | <br>TPP: | ||
+ | <h2>msconvert</h2> | ||
+ | <h3>mzXML</h3> | ||
+ | Conversion: produces truncated file | ||
+ | <br>X!Tandem search: | ||
+ | <br>TPP: | ||
+ | <h3>mzML</h3> | ||
+ | Conversion: OK | ||
+ | <br>X!Tandem search: | ||
+ | <br>TPP: | ||
+ | |||
+ | |||
+ | <hr> | ||
+ | <h1>Thermo</h1> | ||
+ | Raw file type: .RAW file | ||
+ | <br> | ||
+ | raw-to-mzXML converter: ReAdW | ||
+ | <h2>ReAdW</h2> | ||
+ | Conversion: | ||
+ | <br>X!Tandem search: | ||
+ | <br>TPP: | ||
+ | <h2>msconvert</h2> | ||
+ | <h3>mzXML</h3> | ||
+ | Conversion: | ||
+ | <br>X!Tandem search: | ||
+ | <br>TPP: | ||
+ | <h3>mzML</h3> | ||
+ | Conversion: | ||
+ | <br>X!Tandem search: | ||
+ | <br>TPP: | ||
+ | |||
+ | <br> | ||
+ | <hr> | ||
+ | <h1>MDS/Sciex for ABI and Agilent</h1> | ||
+ | Raw file type: .wiff file | ||
+ | <br> | ||
+ | raw-to-mzXML converter: mzWiff | ||
+ | <h2>mzWiff</h2> | ||
+ | Conversion: | ||
+ | <br>X!Tandem search: | ||
+ | <br>TPP: | ||
+ | <h2>msconvert</h2> | ||
+ | <h3>mzXML</h3> | ||
+ | Conversion: | ||
+ | <br>X!Tandem search: | ||
+ | <br>TPP: | ||
+ | <h3>mzML</h3> | ||
+ | Conversion: | ||
+ | <br>X!Tandem search: | ||
+ | <br>TPP: |
Revision as of 18:29, 17 March 2010
Testing of MSconvert is in progress and results will be posted here as they come.
Msconvert can convert successfully to mzML. However, it does not work for mzXML fully. Trapper can convert to mzXML only.
Contents |
Agilent
Raw file type: .d directory
raw-to-mzXML converter: trapper
trapper
mzXML
Conversion: OK
X!Tandem search:
TPP:
msconvert
mzXML
Conversion: produces truncated file
X!Tandem search:
TPP:
mzML
Conversion: OK
X!Tandem search:
TPP:
Thermo
Raw file type: .RAW file
raw-to-mzXML converter: ReAdW
ReAdW
Conversion:
X!Tandem search:
TPP:
msconvert
mzXML
Conversion:
X!Tandem search:
TPP:
mzML
Conversion:
X!Tandem search:
TPP:
MDS/Sciex for ABI and Agilent
Raw file type: .wiff file
raw-to-mzXML converter: mzWiff
mzWiff
Conversion:
X!Tandem search:
TPP:
msconvert
mzXML
Conversion:
X!Tandem search:
TPP:
mzML
Conversion:
X!Tandem search:
TPP: