GetProteinAPI

From SPCTools

Revision as of 15:01, 17 April 2014 Dcampbel (Talk | contribs) ← Previous diff		Current revision Dcampbel (Talk | contribs)
Line 1:		Line 1:
-	GetTransitions allows users to view information about a particular protein in the Peptide Atlas.	+	<pre>
		+	GetProtein is a script that allows users to view information about a particular protein
		+	in the Peptide Atlas.
		+	</pre>
-	In order to link directly to a GetProtein page, you must define a protein and build; the latter	+	<pre>
-	can be done either with a build_id, or more reliably with an organism name (e.g. Human).	+	In order to link directly to a GetProtein page, you must define a protein and build; the
		+	latter can be done either with a build_id, or more reliably with an organism name
		+	(e.g. Human).
	Example query:		Example query:
	https://db.systemsbiology.net/sbeams/cgi/PeptideAtlas/GetProtein?organism_name=Human;protein_name=P49588;apply_action=GO		https://db.systemsbiology.net/sbeams/cgi/PeptideAtlas/GetProtein?organism_name=Human;protein_name=P49588;apply_action=GO
-	The query has the following parts:	+
		+
		+	The query has the following required parts (base URL plus parameters):
	URL: https://db.systemsbiology.net/devDC/sbeams/cgi/PeptideAtlas/GetProtein		URL: https://db.systemsbiology.net/devDC/sbeams/cgi/PeptideAtlas/GetProtein
	Organism: organism_name=Human		Organism: organism_name=Human
	Protein Accession: protein_name=P49588		Protein Accession: protein_name=P49588
	Run token: apply_action=GO		Run token: apply_action=GO
		+	</pre>

---

Current revision

GetProtein is a script that allows users to view information about a particular protein
in the Peptide Atlas.  

In order to link directly to a GetProtein page, you must define a protein and build; the
latter can be done either with a build_id, or more reliably with an organism name 
(e.g. Human).

Example query:
https://db.systemsbiology.net/sbeams/cgi/PeptideAtlas/GetProtein?organism_name=Human;protein_name=P49588;apply_action=GO


The query has the following required parts (base URL plus parameters):
URL: https://db.systemsbiology.net/devDC/sbeams/cgi/PeptideAtlas/GetProtein
Organism: organism_name=Human
Protein Accession: protein_name=P49588
Run token: apply_action=GO