Software:ReAdW

From SPCTools

Revision as of 19:43, 13 April 2007 Jtasman (Talk | contribs) (adding link to Sashimi file release) ← Previous diff		Current revision JoeS (Talk | contribs) (→Getting the software)
Line 1:		Line 1:
		+	'''ReAdW: Thermo Xcalibur .raw files to mzXML converter'''
	[[image:ReAdW.png|thumb|right]]		[[image:ReAdW.png|thumb|right]]
		+
		+	==Description==
		+
		+	Command-line program to convert Xcalibur native acquisition (.RAW) files to [[Formats:mzXML|mzXML]]. The program '''requires''' the XRawfile library from ThermoFinnigan. The XRawfile library is installed with the Xcalibur software suite; you must obtain this software from ThermoFinnigan.
		+
		+	'''Note:''' This program is no longer supported. Users are strongly urged to use the msconvert program released as part of the ProteoWizard package. For convenience the latest versions of TPP contain this program.
		+
		+	==Current Version==
		+	ReAdW version 4.3.1 was released on September 9, 2009. The latest release can be always be found at the [http://sourceforge.net/projects/sashimi/files/ Sashimi SourceForge release page]]
		+
		+	==Requirements==
		+	Because this program depends on Windows-only vendor libraries from Thermo, this code will only work under Windows with Thermo's XCalibur software installed.
	==Getting the software==		==Getting the software==
-	'''This software is included in the current [[Software:TPP|TPP]] distribution.'''	+
		+	'''This software is no longer included in the current [[Software:TPP|TPP]] distribution.'''
		+
		+	*see Requirements
	Additional methods for obtaining the software are:		Additional methods for obtaining the software are:
-	*Dowload from SourceForge Sashimi project file release: [http://sourceforge.net/project/showfiles.php?group_id=69281&package_id=68160]	+	*Download from SourceForge Sashimi project file release: [http://sourceforge.net/project/showfiles.php?group_id=69281&package_id=68160]
-	*Browse development source code: [http://sashimi.cvs.sourceforge.net/sashimi/ReAdW/] ''Note: Although the development CVS code may be more recent than the Sashimi File Release; the Sashimi File Release (linked above) is recommended for stability.''	+	*Browse sourcecode from on Sashimi project SVN[http://sashimi.svn.sourceforge.net/viewvc/sashimi].
-	==Description==	+	==Troubleshooting==
-	Visual C++ program to convert Xcalibur native acquisition (.RAW) files to mzXML. The program '''requires''' the XRawfile library from ThermoFinnigan. The XRawfile library is installed with the Xcalibur software suite; you must obtain this software from ThermoFinnigan.	+	===Xcalibur is installed, but the ReAdW doesn't work===
		+	Start menu->run, enter
		+	regsvr32 "C:\Xcalibur2\system\programs\XRawfile2.dll"
		+	Try running ReAdW again.

---

Current revision

ReAdW: Thermo Xcalibur .raw files to mzXML converter

Contents 1 Description 2 Current Version 3 Requirements 4 Getting the software 5 Troubleshooting 5.1 Xcalibur is installed, but the ReAdW doesn't work

Description

Command-line program to convert Xcalibur native acquisition (.RAW) files to mzXML. The program requires the XRawfile library from ThermoFinnigan. The XRawfile library is installed with the Xcalibur software suite; you must obtain this software from ThermoFinnigan.

Note: This program is no longer supported. Users are strongly urged to use the msconvert program released as part of the ProteoWizard package. For convenience the latest versions of TPP contain this program.

Current Version

ReAdW version 4.3.1 was released on September 9, 2009. The latest release can be always be found at the Sashimi SourceForge release page]

Requirements

Because this program depends on Windows-only vendor libraries from Thermo, this code will only work under Windows with Thermo's XCalibur software installed.

Getting the software

This software is no longer included in the current TPP distribution.

• see Requirements

Additional methods for obtaining the software are:

• Download from SourceForge Sashimi project file release: [1]
• Browse sourcecode from on Sashimi project SVN[2].

Troubleshooting

Xcalibur is installed, but the ReAdW doesn't work

Start menu->run, enter

regsvr32 "C:\Xcalibur2\system\programs\XRawfile2.dll"

Try running ReAdW again.