Software:Libra

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 +==Getting the software==
'''This software is included in the current [[Software:TPP|TPP]] distribution.''' '''This software is included in the current [[Software:TPP|TPP]] distribution.'''
 +
 +==In a nutshell==
 +Libra is a module within the trans-proteomic pipeline to perform quantification on MS/MS spectra that have multi-reagent labeled peptides. More specifically, at ISB we use Libra on MS/MS spectra of iTRAQ labeled samples.
 +
 +==More detail==
 +More detailed information can be found at [http://sashimi.cvs.sourceforge.net/*checkout*/sashimi/trans_proteomic_pipeline/src/Quantitation/Libra/docs/libra_info.html Sourceforge], including:
 +
 +* Command line syntax for using Libra
 +* The condition file
 +* Details about what Libra does
 +* How accurate is the quantitation?
 +
 +
 +==Authors==
 +*'''Patrick Pedrioli''': original code author of Quantitation
 +*'''Andrew Keller''': peptide assignment to proteins within pipeline
 +*'''Nichole King''': code maintenance/additions/corrections

Revision as of 22:37, 9 April 2007

Contents

Getting the software

This software is included in the current TPP distribution.

In a nutshell

Libra is a module within the trans-proteomic pipeline to perform quantification on MS/MS spectra that have multi-reagent labeled peptides. More specifically, at ISB we use Libra on MS/MS spectra of iTRAQ labeled samples.

More detail

More detailed information can be found at Sourceforge, including:

  • Command line syntax for using Libra
  • The condition file
  • Details about what Libra does
  • How accurate is the quantitation?


Authors

  • Patrick Pedrioli: original code author of Quantitation
  • Andrew Keller: peptide assignment to proteins within pipeline
  • Nichole King: code maintenance/additions/corrections
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