Seattle Proteome Center (SPC) - Proteomics Tools
NHLBI Proteomics Center at the Institute for Systems Biology

mzXML Schema

This is the schema for mzXML (the common file format for MS data). Stable version (2.1):

View mzXML Schema
View mzXML Schema Documentation
Sample mzXML File

Version 2.0 of the mzXML schema introduces the use of ontologies. Here you will find the current draft of the mzXML ontology in Excel format.

To navigate you can click on the red text in the image map below!